Gene : Phvul.003G061500 P. vulgaris v2.1
Defline:  (1 of 1) 4.1.3.36 - 1,4-dihydroxy-2-naphthoyl-CoA synthase / o-succinylbenzoyl-CoA 1,4-dihydroxy-2-naphthoate-lyase (cyclizing) Genomic Order:  633
Name:  ? Phvul.003G061500 Secondary Identifier:  ? PAC:37145162
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5837 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G061500 0.5kb upstream 0.5kb upstream 4066 true Chr03: 8475004-8479069 Phaseolus vulgaris
Phvul.003G061500 0.5kb upstream 0.5kb upstream 500 false Chr03: 8478570-8479069 Phaseolus vulgaris
Phvul.003G061500 0.5kb downstream 0.5kb downstream 4066 true Chr03: 8474504-8478569 Phaseolus vulgaris
Phvul.003G061500 0.5kb downstream 0.5kb downstream 500 false Chr03: 8474504-8475003 Phaseolus vulgaris
Phvul.003G061500 1.0kb upstream 1.0kb upstream 4566 true Chr03: 8475004-8479569 Phaseolus vulgaris
Phvul.003G061500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 8478570-8479569 Phaseolus vulgaris
Phvul.003G061500 1.0kb downstream 1.0kb downstream 4566 true Chr03: 8474004-8478569 Phaseolus vulgaris
Phvul.003G061500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 8474004-8475003 Phaseolus vulgaris
Phvul.003G061500 2.0kb upstream 2.0kb upstream 5566 true Chr03: 8475004-8480569 Phaseolus vulgaris
Phvul.003G061500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 8478570-8480569 Phaseolus vulgaris
Phvul.003G061500 2.0kb downstream 2.0kb downstream 5566 true Chr03: 8473004-8478569 Phaseolus vulgaris
Phvul.003G061500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 8473004-8475003 Phaseolus vulgaris
Phvul.003G061500 5.0kb upstream 5.0kb upstream 8566 true Chr03: 8475004-8483569 Phaseolus vulgaris
Phvul.003G061500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 8478570-8483569 Phaseolus vulgaris
Phvul.003G061500 5.0kb downstream 5.0kb downstream 8566 true Chr03: 8470004-8478569 Phaseolus vulgaris
Phvul.003G061500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 8470004-8475003 Phaseolus vulgaris
Phvul.003G061500 10.0kb upstream 10.0kb upstream 13566 true Chr03: 8475004-8488569 Phaseolus vulgaris
Phvul.003G061500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 8478570-8488569 Phaseolus vulgaris
Phvul.003G061500 10.0kb downstream 10.0kb downstream 13566 true Chr03: 8465004-8478569 Phaseolus vulgaris
Phvul.003G061500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 8465004-8475003 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301826 5265 Fabidae View MSA
124066910 5270 Rosid View MSA
123738598 5271 Pentapetalae View MSA
122786230 5272 Eudicot View MSA
122043180 5273 Angiosperm View MSA
121346128 5274 Embryophyte View MSA
123423771 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.8133 0.0 25.9736    
cufflinks 7.20371 0.0 27.3397    
cufflinks 21.78 0.0 69.6382   High
cufflinks 5.15662 0.0 21.3177    
cufflinks 6.04728 0.0 24.3549    
cufflinks 15.5141 0.0 51.2489   High
cufflinks 1.0699 0.0 5.94032   Low
cufflinks 1.82179 0.0 6.37777   Low
cufflinks 2.22364 0.0 10.2564    
cufflinks 2.71208 0.0 11.4429    
cufflinks 4.86451 0.0 20.3858    

0 Strain