Gene : Phvul.003G058400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32285:SF15 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 37-RELATED Genomic Order:  602
Name:  ? Phvul.003G058400 Secondary Identifier:  ? PAC:37146336
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G058400 0.5kb upstream 0.5kb upstream 4494 true Chr03: 7930080-7934573 Phaseolus vulgaris
Phvul.003G058400 0.5kb upstream 0.5kb upstream 500 false Chr03: 7934074-7934573 Phaseolus vulgaris
Phvul.003G058400 0.5kb downstream 0.5kb downstream 4494 true Chr03: 7929580-7934073 Phaseolus vulgaris
Phvul.003G058400 0.5kb downstream 0.5kb downstream 500 false Chr03: 7929580-7930079 Phaseolus vulgaris
Phvul.003G058400 1.0kb upstream 1.0kb upstream 4994 true Chr03: 7930080-7935073 Phaseolus vulgaris
Phvul.003G058400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 7934074-7935073 Phaseolus vulgaris
Phvul.003G058400 1.0kb downstream 1.0kb downstream 4994 true Chr03: 7929080-7934073 Phaseolus vulgaris
Phvul.003G058400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 7929080-7930079 Phaseolus vulgaris
Phvul.003G058400 2.0kb upstream 2.0kb upstream 5994 true Chr03: 7930080-7936073 Phaseolus vulgaris
Phvul.003G058400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 7934074-7936073 Phaseolus vulgaris
Phvul.003G058400 2.0kb downstream 2.0kb downstream 5994 true Chr03: 7928080-7934073 Phaseolus vulgaris
Phvul.003G058400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 7928080-7930079 Phaseolus vulgaris
Phvul.003G058400 5.0kb upstream 5.0kb upstream 8994 true Chr03: 7930080-7939073 Phaseolus vulgaris
Phvul.003G058400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 7934074-7939073 Phaseolus vulgaris
Phvul.003G058400 5.0kb downstream 5.0kb downstream 8994 true Chr03: 7925080-7934073 Phaseolus vulgaris
Phvul.003G058400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 7925080-7930079 Phaseolus vulgaris
Phvul.003G058400 10.0kb upstream 10.0kb upstream 13994 true Chr03: 7930080-7944073 Phaseolus vulgaris
Phvul.003G058400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 7934074-7944073 Phaseolus vulgaris
Phvul.003G058400 10.0kb downstream 10.0kb downstream 13994 true Chr03: 7920080-7934073 Phaseolus vulgaris
Phvul.003G058400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 7920080-7930079 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310732 5265 Fabidae View MSA
124064716 5270 Rosid View MSA
123736732 5271 Pentapetalae View MSA
122797510 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.00529 0.0 11.8681   Low
cufflinks 17.4583 0.0 45.5869    
cufflinks 10.6221 0.0 28.6235    
cufflinks 9.50062 0.0 25.9978    
cufflinks 10.0823 0.0 27.5138    
cufflinks 8.06623 0.0 22.2578    
cufflinks 20.8547 0.0 54.0801    
cufflinks 43.2151 0.0 112.935 High High
cufflinks 22.6397 0.0 58.6293    
cufflinks 1.40363 0.0 4.70567   Low
cufflinks 12.6884 0.0 33.8885    

0 Strain