Gene : Phvul.003G045500 P. vulgaris v2.1
Defline:  (1 of 2) KOG3292 - Predicted membrane protein Genomic Order:  463
Name:  ? Phvul.003G045500 Secondary Identifier:  ? PAC:37148376
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G045500 0.5kb upstream 0.5kb upstream 8212 true Chr03: 5319369-5327580 Phaseolus vulgaris
Phvul.003G045500 0.5kb upstream 0.5kb upstream 500 false Chr03: 5319369-5319868 Phaseolus vulgaris
Phvul.003G045500 0.5kb downstream 0.5kb downstream 8212 true Chr03: 5319869-5328080 Phaseolus vulgaris
Phvul.003G045500 0.5kb downstream 0.5kb downstream 500 false Chr03: 5327581-5328080 Phaseolus vulgaris
Phvul.003G045500 1.0kb upstream 1.0kb upstream 8712 true Chr03: 5318869-5327580 Phaseolus vulgaris
Phvul.003G045500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 5318869-5319868 Phaseolus vulgaris
Phvul.003G045500 1.0kb downstream 1.0kb downstream 8712 true Chr03: 5319869-5328580 Phaseolus vulgaris
Phvul.003G045500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 5327581-5328580 Phaseolus vulgaris
Phvul.003G045500 2.0kb upstream 2.0kb upstream 9712 true Chr03: 5317869-5327580 Phaseolus vulgaris
Phvul.003G045500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 5317869-5319868 Phaseolus vulgaris
Phvul.003G045500 2.0kb downstream 2.0kb downstream 9712 true Chr03: 5319869-5329580 Phaseolus vulgaris
Phvul.003G045500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 5327581-5329580 Phaseolus vulgaris
Phvul.003G045500 5.0kb upstream 5.0kb upstream 12712 true Chr03: 5314869-5327580 Phaseolus vulgaris
Phvul.003G045500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 5314869-5319868 Phaseolus vulgaris
Phvul.003G045500 5.0kb downstream 5.0kb downstream 12712 true Chr03: 5319869-5332580 Phaseolus vulgaris
Phvul.003G045500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 5327581-5332580 Phaseolus vulgaris
Phvul.003G045500 10.0kb upstream 10.0kb upstream 17712 true Chr03: 5309869-5327580 Phaseolus vulgaris
Phvul.003G045500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 5309869-5319868 Phaseolus vulgaris
Phvul.003G045500 10.0kb downstream 10.0kb downstream 17712 true Chr03: 5319869-5337580 Phaseolus vulgaris
Phvul.003G045500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 5327581-5337580 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026462 5273 Angiosperm View MSA
122307388 5265 Fabidae View MSA
124067528 5270 Rosid View MSA
123743297 5271 Pentapetalae View MSA
122787099 5272 Eudicot View MSA
121347335 5274 Embryophyte View MSA
123428191 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.48774 0.0 21.2476   High
cufflinks 0.461441 0.0 1.92539 Low  
cufflinks 0.682105 0.0 2.7461    
cufflinks 5.73496 0.0 19.1412   High
cufflinks 4.03461 0.0 13.9903    
cufflinks 0.424297 0.0 1.78343 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.696006 0.0 2.81273    
cufflinks 0.109255 0.0 0.530667 Low Low
cufflinks 0.256485 0.0 1.12975 Low  
cufflinks 6.07037 0.0 20.2009   High

0 Strain