Gene : Phvul.003G166900 P. vulgaris v2.1
Defline:  (1 of 28) 2.3.1.48 - Histone acetyltransferase Genomic Order:  1696
Name:  ? Phvul.003G166900 Secondary Identifier:  ? PAC:37148106
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G166900 0.5kb upstream 0.5kb upstream 4342 true Chr03: 38708290-38712631 Phaseolus vulgaris
Phvul.003G166900 0.5kb upstream 0.5kb upstream 500 false Chr03: 38712132-38712631 Phaseolus vulgaris
Phvul.003G166900 0.5kb downstream 0.5kb downstream 4342 true Chr03: 38707790-38712131 Phaseolus vulgaris
Phvul.003G166900 0.5kb downstream 0.5kb downstream 500 false Chr03: 38707790-38708289 Phaseolus vulgaris
Phvul.003G166900 1.0kb upstream 1.0kb upstream 4842 true Chr03: 38708290-38713131 Phaseolus vulgaris
Phvul.003G166900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 38712132-38713131 Phaseolus vulgaris
Phvul.003G166900 1.0kb downstream 1.0kb downstream 4842 true Chr03: 38707290-38712131 Phaseolus vulgaris
Phvul.003G166900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 38707290-38708289 Phaseolus vulgaris
Phvul.003G166900 2.0kb upstream 2.0kb upstream 5842 true Chr03: 38708290-38714131 Phaseolus vulgaris
Phvul.003G166900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 38712132-38714131 Phaseolus vulgaris
Phvul.003G166900 2.0kb downstream 2.0kb downstream 5842 true Chr03: 38706290-38712131 Phaseolus vulgaris
Phvul.003G166900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 38706290-38708289 Phaseolus vulgaris
Phvul.003G166900 5.0kb upstream 5.0kb upstream 8842 true Chr03: 38708290-38717131 Phaseolus vulgaris
Phvul.003G166900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 38712132-38717131 Phaseolus vulgaris
Phvul.003G166900 5.0kb downstream 5.0kb downstream 8842 true Chr03: 38703290-38712131 Phaseolus vulgaris
Phvul.003G166900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 38703290-38708289 Phaseolus vulgaris
Phvul.003G166900 10.0kb upstream 10.0kb upstream 13842 true Chr03: 38708290-38722131 Phaseolus vulgaris
Phvul.003G166900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 38712132-38722131 Phaseolus vulgaris
Phvul.003G166900 10.0kb downstream 10.0kb downstream 13842 true Chr03: 38698290-38712131 Phaseolus vulgaris
Phvul.003G166900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 38698290-38708289 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048144 5273 Angiosperm View MSA
122301563 5265 Fabidae View MSA
124066540 5270 Rosid View MSA
123751071 5271 Pentapetalae View MSA
122788573 5272 Eudicot View MSA
121310863 5274 Embryophyte View MSA
123348247 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.6134 0.0 22.1816    
cufflinks 7.26212 0.0 24.7412    
cufflinks 2.19816 0.0 8.34453   Low
cufflinks 5.97771 0.0 21.2387    
cufflinks 8.31605 0.0 31.8935   High
cufflinks 4.17593 0.0 15.8549    
cufflinks 2.9025 0.0 10.0238    
cufflinks 2.80927 0.0 9.77843   Low
cufflinks 2.87672 0.0 10.0275    
cufflinks 5.95038 0.0 23.144    
cufflinks 9.64119 0.0 31.2953   High

0 Strain