Gene : Phvul.003G155400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11802:SF87 - SERINE CARBOXYPEPTIDASE 24-RELATED Genomic Order:  1578
Name:  ? Phvul.003G155400 Secondary Identifier:  ? PAC:37147222
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G155400 0.5kb upstream 0.5kb upstream 6517 true Chr03: 37095275-37101791 Phaseolus vulgaris
Phvul.003G155400 0.5kb upstream 0.5kb upstream 500 false Chr03: 37101292-37101791 Phaseolus vulgaris
Phvul.003G155400 0.5kb downstream 0.5kb downstream 6517 true Chr03: 37094775-37101291 Phaseolus vulgaris
Phvul.003G155400 0.5kb downstream 0.5kb downstream 500 false Chr03: 37094775-37095274 Phaseolus vulgaris
Phvul.003G155400 1.0kb upstream 1.0kb upstream 7017 true Chr03: 37095275-37102291 Phaseolus vulgaris
Phvul.003G155400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 37101292-37102291 Phaseolus vulgaris
Phvul.003G155400 1.0kb downstream 1.0kb downstream 7017 true Chr03: 37094275-37101291 Phaseolus vulgaris
Phvul.003G155400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 37094275-37095274 Phaseolus vulgaris
Phvul.003G155400 2.0kb upstream 2.0kb upstream 8017 true Chr03: 37095275-37103291 Phaseolus vulgaris
Phvul.003G155400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 37101292-37103291 Phaseolus vulgaris
Phvul.003G155400 2.0kb downstream 2.0kb downstream 8017 true Chr03: 37093275-37101291 Phaseolus vulgaris
Phvul.003G155400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 37093275-37095274 Phaseolus vulgaris
Phvul.003G155400 5.0kb upstream 5.0kb upstream 11017 true Chr03: 37095275-37106291 Phaseolus vulgaris
Phvul.003G155400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 37101292-37106291 Phaseolus vulgaris
Phvul.003G155400 5.0kb downstream 5.0kb downstream 11017 true Chr03: 37090275-37101291 Phaseolus vulgaris
Phvul.003G155400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 37090275-37095274 Phaseolus vulgaris
Phvul.003G155400 10.0kb upstream 10.0kb upstream 16017 true Chr03: 37095275-37111291 Phaseolus vulgaris
Phvul.003G155400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 37101292-37111291 Phaseolus vulgaris
Phvul.003G155400 10.0kb downstream 10.0kb downstream 16017 true Chr03: 37085275-37101291 Phaseolus vulgaris
Phvul.003G155400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 37085275-37095274 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041243 5273 Angiosperm View MSA
122302922 5265 Fabidae View MSA
124062355 5270 Rosid View MSA
123741217 5271 Pentapetalae View MSA
122786127 5272 Eudicot View MSA
121349139 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.290045 0.0 1.1029 Low  
cufflinks 0.136848 0.0 0.552372 Low  
cufflinks 19.492 0.0 50.4071   High
cufflinks 0.862524 0.0 2.99135    
cufflinks 0.376312 0.0 1.41074 Low  
cufflinks 14.8682 0.0 38.7131   High
cufflinks 3.50731 0.0 10.2848    
cufflinks 3.21048 0.0 9.43968    
cufflinks 11.8799 0.0 31.3354   High
cufflinks 0.00859506 0.0 0.0459741 Low Low
cufflinks 0.430519 0.0 1.59452 Low  

0 Strain