Gene : Phvul.003G158500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11177:SF219 - CHITINASE-LIKE PROTEIN-RELATED Genomic Order:  1611
Name:  ? Phvul.003G158500 Secondary Identifier:  ? PAC:37147674
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G158500 0.5kb upstream 0.5kb upstream 2064 true Chr03: 37463841-37465904 Phaseolus vulgaris
Phvul.003G158500 0.5kb upstream 0.5kb upstream 500 false Chr03: 37463841-37464340 Phaseolus vulgaris
Phvul.003G158500 0.5kb downstream 0.5kb downstream 2064 true Chr03: 37464341-37466404 Phaseolus vulgaris
Phvul.003G158500 0.5kb downstream 0.5kb downstream 500 false Chr03: 37465905-37466404 Phaseolus vulgaris
Phvul.003G158500 1.0kb upstream 1.0kb upstream 2564 true Chr03: 37463341-37465904 Phaseolus vulgaris
Phvul.003G158500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 37463341-37464340 Phaseolus vulgaris
Phvul.003G158500 1.0kb downstream 1.0kb downstream 2564 true Chr03: 37464341-37466904 Phaseolus vulgaris
Phvul.003G158500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 37465905-37466904 Phaseolus vulgaris
Phvul.003G158500 2.0kb upstream 2.0kb upstream 3564 true Chr03: 37462341-37465904 Phaseolus vulgaris
Phvul.003G158500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 37462341-37464340 Phaseolus vulgaris
Phvul.003G158500 2.0kb downstream 2.0kb downstream 3564 true Chr03: 37464341-37467904 Phaseolus vulgaris
Phvul.003G158500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 37465905-37467904 Phaseolus vulgaris
Phvul.003G158500 5.0kb upstream 5.0kb upstream 6564 true Chr03: 37459341-37465904 Phaseolus vulgaris
Phvul.003G158500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 37459341-37464340 Phaseolus vulgaris
Phvul.003G158500 5.0kb downstream 5.0kb downstream 6564 true Chr03: 37464341-37470904 Phaseolus vulgaris
Phvul.003G158500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 37465905-37470904 Phaseolus vulgaris
Phvul.003G158500 10.0kb upstream 10.0kb upstream 11564 true Chr03: 37454341-37465904 Phaseolus vulgaris
Phvul.003G158500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 37454341-37464340 Phaseolus vulgaris
Phvul.003G158500 10.0kb downstream 10.0kb downstream 11564 true Chr03: 37464341-37475904 Phaseolus vulgaris
Phvul.003G158500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 37465905-37475904 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311378 5265 Fabidae View MSA
124068556 5270 Rosid View MSA
123750744 5271 Pentapetalae View MSA
122797322 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.59927 0.0 24.2343    
cufflinks 26.1455 0.0 68.0111    
cufflinks 33.6216 0.0 86.9575    
cufflinks 10.5743 0.0 29.3022    
cufflinks 29.0804 0.0 75.5009    
cufflinks 69.1418 0.0 181.702 High High
cufflinks 1.34777 0.0 4.67853    
cufflinks 6.57031 0.0 18.9766    
cufflinks 0.133685 0.0 0.565289 Low Low
cufflinks 0.387836 0.0 1.5043   Low
cufflinks 57.1982 0.0 148.743 High  

0 Strain