Gene : Phvul.003G159800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31003//PTHR31003:SF3 - MYB FAMILY TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Genomic Order:  1624
Name:  ? Phvul.003G159800 Secondary Identifier:  ? PAC:37147526
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G159800 0.5kb upstream 0.5kb upstream 3358 true Chr03: 37766561-37769918 Phaseolus vulgaris
Phvul.003G159800 0.5kb upstream 0.5kb upstream 500 false Chr03: 37766561-37767060 Phaseolus vulgaris
Phvul.003G159800 0.5kb downstream 0.5kb downstream 3358 true Chr03: 37767061-37770418 Phaseolus vulgaris
Phvul.003G159800 0.5kb downstream 0.5kb downstream 500 false Chr03: 37769919-37770418 Phaseolus vulgaris
Phvul.003G159800 1.0kb upstream 1.0kb upstream 3858 true Chr03: 37766061-37769918 Phaseolus vulgaris
Phvul.003G159800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 37766061-37767060 Phaseolus vulgaris
Phvul.003G159800 1.0kb downstream 1.0kb downstream 3858 true Chr03: 37767061-37770918 Phaseolus vulgaris
Phvul.003G159800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 37769919-37770918 Phaseolus vulgaris
Phvul.003G159800 2.0kb upstream 2.0kb upstream 4858 true Chr03: 37765061-37769918 Phaseolus vulgaris
Phvul.003G159800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 37765061-37767060 Phaseolus vulgaris
Phvul.003G159800 2.0kb downstream 2.0kb downstream 4858 true Chr03: 37767061-37771918 Phaseolus vulgaris
Phvul.003G159800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 37769919-37771918 Phaseolus vulgaris
Phvul.003G159800 5.0kb upstream 5.0kb upstream 7858 true Chr03: 37762061-37769918 Phaseolus vulgaris
Phvul.003G159800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 37762061-37767060 Phaseolus vulgaris
Phvul.003G159800 5.0kb downstream 5.0kb downstream 7858 true Chr03: 37767061-37774918 Phaseolus vulgaris
Phvul.003G159800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 37769919-37774918 Phaseolus vulgaris
Phvul.003G159800 10.0kb upstream 10.0kb upstream 12858 true Chr03: 37757061-37769918 Phaseolus vulgaris
Phvul.003G159800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 37757061-37767060 Phaseolus vulgaris
Phvul.003G159800 10.0kb downstream 10.0kb downstream 12858 true Chr03: 37767061-37779918 Phaseolus vulgaris
Phvul.003G159800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 37769919-37779918 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303225 5265 Fabidae View MSA
124069300 5270 Rosid View MSA
123741348 5271 Pentapetalae View MSA
122789527 5272 Eudicot View MSA
122049766 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.37757 0.0 7.22231    
cufflinks 2.88173 0.0 8.54424    
cufflinks 2.69487 0.0 8.05723    
cufflinks 3.24556 0.0 9.4486    
cufflinks 3.17448 0.0 9.33267    
cufflinks 2.43238 0.0 7.34602    
cufflinks 1.70811 0.0 5.32071    
cufflinks 0.516118 0.0 1.84676   Low
cufflinks 1.39134 0.0 4.4279    
cufflinks 2.79535 0.0 8.33702    
cufflinks 4.24772 0.0 12.0519   High

0 Strain