Gene : Phvul.003G147800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31713:SF12 - CALMODULIN-BINDING PROTEIN Genomic Order:  1501
Name:  ? Phvul.003G147800 Secondary Identifier:  ? PAC:37145699
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G147800 0.5kb upstream 0.5kb upstream 8475 true Chr03: 35822893-35831367 Phaseolus vulgaris
Phvul.003G147800 0.5kb upstream 0.5kb upstream 500 false Chr03: 35830868-35831367 Phaseolus vulgaris
Phvul.003G147800 0.5kb downstream 0.5kb downstream 8475 true Chr03: 35822393-35830867 Phaseolus vulgaris
Phvul.003G147800 0.5kb downstream 0.5kb downstream 500 false Chr03: 35822393-35822892 Phaseolus vulgaris
Phvul.003G147800 1.0kb upstream 1.0kb upstream 8975 true Chr03: 35822893-35831867 Phaseolus vulgaris
Phvul.003G147800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 35830868-35831867 Phaseolus vulgaris
Phvul.003G147800 1.0kb downstream 1.0kb downstream 8975 true Chr03: 35821893-35830867 Phaseolus vulgaris
Phvul.003G147800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 35821893-35822892 Phaseolus vulgaris
Phvul.003G147800 2.0kb upstream 2.0kb upstream 9975 true Chr03: 35822893-35832867 Phaseolus vulgaris
Phvul.003G147800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 35830868-35832867 Phaseolus vulgaris
Phvul.003G147800 2.0kb downstream 2.0kb downstream 9975 true Chr03: 35820893-35830867 Phaseolus vulgaris
Phvul.003G147800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 35820893-35822892 Phaseolus vulgaris
Phvul.003G147800 5.0kb upstream 5.0kb upstream 12975 true Chr03: 35822893-35835867 Phaseolus vulgaris
Phvul.003G147800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 35830868-35835867 Phaseolus vulgaris
Phvul.003G147800 5.0kb downstream 5.0kb downstream 12975 true Chr03: 35817893-35830867 Phaseolus vulgaris
Phvul.003G147800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 35817893-35822892 Phaseolus vulgaris
Phvul.003G147800 10.0kb upstream 10.0kb upstream 17975 true Chr03: 35822893-35840867 Phaseolus vulgaris
Phvul.003G147800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 35830868-35840867 Phaseolus vulgaris
Phvul.003G147800 10.0kb downstream 10.0kb downstream 17975 true Chr03: 35812893-35830867 Phaseolus vulgaris
Phvul.003G147800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 35812893-35822892 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041199 5273 Angiosperm View MSA
122300045 5265 Fabidae View MSA
124060519 5270 Rosid View MSA
123753678 5271 Pentapetalae View MSA
122786667 5272 Eudicot View MSA
121350867 5274 Embryophyte View MSA
123381913 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.6031 0.0 61.5814    
cufflinks 30.5492 0.0 80.7911    
cufflinks 25.3494 0.0 66.3446    
cufflinks 16.3367 0.0 42.2273   Low
cufflinks 26.2177 0.0 68.4511    
cufflinks 45.4829 0.0 124.453 High High
cufflinks 38.5991 0.0 104.256 High High
cufflinks 24.9372 0.0 65.375    
cufflinks 28.6436 0.0 75.4734    
cufflinks 36.2964 0.0 97.0884 High  
cufflinks 34.818 0.0 92.6648 High  

0 Strain