Gene : Phvul.003G146500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21236//PTHR21236:SF9 - GOLGI MEMBRANE PROTEIN YIP1 // SUBFAMILY NOT NAMED Genomic Order:  1488
Name:  ? Phvul.003G146500 Secondary Identifier:  ? PAC:37144499
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G146500 0.5kb upstream 0.5kb upstream 5550 true Chr03: 35629949-35635498 Phaseolus vulgaris
Phvul.003G146500 0.5kb upstream 0.5kb upstream 500 false Chr03: 35634999-35635498 Phaseolus vulgaris
Phvul.003G146500 0.5kb downstream 0.5kb downstream 5550 true Chr03: 35629449-35634998 Phaseolus vulgaris
Phvul.003G146500 0.5kb downstream 0.5kb downstream 500 false Chr03: 35629449-35629948 Phaseolus vulgaris
Phvul.003G146500 1.0kb upstream 1.0kb upstream 6050 true Chr03: 35629949-35635998 Phaseolus vulgaris
Phvul.003G146500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 35634999-35635998 Phaseolus vulgaris
Phvul.003G146500 1.0kb downstream 1.0kb downstream 6050 true Chr03: 35628949-35634998 Phaseolus vulgaris
Phvul.003G146500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 35628949-35629948 Phaseolus vulgaris
Phvul.003G146500 2.0kb upstream 2.0kb upstream 7050 true Chr03: 35629949-35636998 Phaseolus vulgaris
Phvul.003G146500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 35634999-35636998 Phaseolus vulgaris
Phvul.003G146500 2.0kb downstream 2.0kb downstream 7050 true Chr03: 35627949-35634998 Phaseolus vulgaris
Phvul.003G146500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 35627949-35629948 Phaseolus vulgaris
Phvul.003G146500 5.0kb upstream 5.0kb upstream 10050 true Chr03: 35629949-35639998 Phaseolus vulgaris
Phvul.003G146500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 35634999-35639998 Phaseolus vulgaris
Phvul.003G146500 5.0kb downstream 5.0kb downstream 10050 true Chr03: 35624949-35634998 Phaseolus vulgaris
Phvul.003G146500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 35624949-35629948 Phaseolus vulgaris
Phvul.003G146500 10.0kb upstream 10.0kb upstream 15050 true Chr03: 35629949-35644998 Phaseolus vulgaris
Phvul.003G146500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 35634999-35644998 Phaseolus vulgaris
Phvul.003G146500 10.0kb downstream 10.0kb downstream 15050 true Chr03: 35619949-35634998 Phaseolus vulgaris
Phvul.003G146500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 35619949-35629948 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301054 5265 Fabidae View MSA
124062311 5270 Rosid View MSA
123737556 5271 Pentapetalae View MSA
122791123 5272 Eudicot View MSA
122046860 5273 Angiosperm View MSA
121349329 5274 Embryophyte View MSA
123428190 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.192 0.0 185.201 High  
cufflinks 60.9337 0.0 157.714 High  
cufflinks 60.9612 0.0 157.872 High  
cufflinks 100.592 0.0 267.34 High High
cufflinks 87.7719 0.0 231.593 High  
cufflinks 60.2703 0.0 155.964 High  
cufflinks 48.0053 0.0 124.086 High Low
cufflinks 42.8854 0.0 110.963 High Low
cufflinks 69.5489 0.0 180.517 High  
cufflinks 61.1267 0.0 158.281 High  
cufflinks 99.5748 0.0 263.605 High High

0 Strain