Gene : Phvul.003G126300 P. vulgaris v2.1
Defline:  (1 of 1) 1.5.1.8 - Saccharopine dehydrogenase (NADP(+), L-lysine-forming) / Lysine-ketoglutarate reductase Genomic Order:  1271
Name:  ? Phvul.003G126300 Secondary Identifier:  ? PAC:37146053
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris LYSINE-DEG1-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G126300 0.5kb upstream 0.5kb upstream 12044 true Chr03: 31412090-31424133 Phaseolus vulgaris
Phvul.003G126300 0.5kb upstream 0.5kb upstream 500 false Chr03: 31423634-31424133 Phaseolus vulgaris
Phvul.003G126300 0.5kb downstream 0.5kb downstream 12044 true Chr03: 31411590-31423633 Phaseolus vulgaris
Phvul.003G126300 0.5kb downstream 0.5kb downstream 500 false Chr03: 31411590-31412089 Phaseolus vulgaris
Phvul.003G126300 1.0kb upstream 1.0kb upstream 12544 true Chr03: 31412090-31424633 Phaseolus vulgaris
Phvul.003G126300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 31423634-31424633 Phaseolus vulgaris
Phvul.003G126300 1.0kb downstream 1.0kb downstream 12544 true Chr03: 31411090-31423633 Phaseolus vulgaris
Phvul.003G126300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 31411090-31412089 Phaseolus vulgaris
Phvul.003G126300 2.0kb upstream 2.0kb upstream 13544 true Chr03: 31412090-31425633 Phaseolus vulgaris
Phvul.003G126300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 31423634-31425633 Phaseolus vulgaris
Phvul.003G126300 2.0kb downstream 2.0kb downstream 13544 true Chr03: 31410090-31423633 Phaseolus vulgaris
Phvul.003G126300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 31410090-31412089 Phaseolus vulgaris
Phvul.003G126300 5.0kb upstream 5.0kb upstream 16544 true Chr03: 31412090-31428633 Phaseolus vulgaris
Phvul.003G126300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 31423634-31428633 Phaseolus vulgaris
Phvul.003G126300 5.0kb downstream 5.0kb downstream 16544 true Chr03: 31407090-31423633 Phaseolus vulgaris
Phvul.003G126300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 31407090-31412089 Phaseolus vulgaris
Phvul.003G126300 10.0kb upstream 10.0kb upstream 21544 true Chr03: 31412090-31433633 Phaseolus vulgaris
Phvul.003G126300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 31423634-31433633 Phaseolus vulgaris
Phvul.003G126300 10.0kb downstream 10.0kb downstream 21544 true Chr03: 31402090-31423633 Phaseolus vulgaris
Phvul.003G126300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 31402090-31412089 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304957 5265 Fabidae View MSA
124068901 5270 Rosid View MSA
123736723 5271 Pentapetalae View MSA
122787907 5272 Eudicot View MSA
122047432 5273 Angiosperm View MSA
121344808 5274 Embryophyte View MSA
123380103 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.0711 0.0 78.0716   High
cufflinks 31.3703 0.0 84.6763   High
cufflinks 6.16575 0.0 16.245    
cufflinks 20.9479 0.0 54.7319    
cufflinks 5.44779 0.0 14.5775   Low
cufflinks 6.50806 0.0 17.1089    
cufflinks 20.869 0.0 54.7016    
cufflinks 11.6088 0.0 30.0068    
cufflinks 23.4633 0.0 61.843    
cufflinks 15.0228 0.0 38.9062    
cufflinks 4.18395 0.0 11.4249   Low

0 Strain