Gene : Phvul.003G127000 P. vulgaris v2.1
Defline:  (1 of 4) 2.7.1.150 - 1-phosphatidylinositol-3-phosphate 5-kinase / Type III PIP kinase Genomic Order:  1277
Name:  ? Phvul.003G127000 Secondary Identifier:  ? PAC:37145578
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6352 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G127000 0.5kb upstream 0.5kb upstream 11517 true Chr03: 31508990-31520506 Phaseolus vulgaris
Phvul.003G127000 0.5kb upstream 0.5kb upstream 500 false Chr03: 31520007-31520506 Phaseolus vulgaris
Phvul.003G127000 0.5kb downstream 0.5kb downstream 11517 true Chr03: 31508490-31520006 Phaseolus vulgaris
Phvul.003G127000 0.5kb downstream 0.5kb downstream 500 false Chr03: 31508490-31508989 Phaseolus vulgaris
Phvul.003G127000 1.0kb upstream 1.0kb upstream 12017 true Chr03: 31508990-31521006 Phaseolus vulgaris
Phvul.003G127000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 31520007-31521006 Phaseolus vulgaris
Phvul.003G127000 1.0kb downstream 1.0kb downstream 12017 true Chr03: 31507990-31520006 Phaseolus vulgaris
Phvul.003G127000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 31507990-31508989 Phaseolus vulgaris
Phvul.003G127000 2.0kb upstream 2.0kb upstream 13017 true Chr03: 31508990-31522006 Phaseolus vulgaris
Phvul.003G127000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 31520007-31522006 Phaseolus vulgaris
Phvul.003G127000 2.0kb downstream 2.0kb downstream 13017 true Chr03: 31506990-31520006 Phaseolus vulgaris
Phvul.003G127000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 31506990-31508989 Phaseolus vulgaris
Phvul.003G127000 5.0kb upstream 5.0kb upstream 16017 true Chr03: 31508990-31525006 Phaseolus vulgaris
Phvul.003G127000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 31520007-31525006 Phaseolus vulgaris
Phvul.003G127000 5.0kb downstream 5.0kb downstream 16017 true Chr03: 31503990-31520006 Phaseolus vulgaris
Phvul.003G127000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 31503990-31508989 Phaseolus vulgaris
Phvul.003G127000 10.0kb upstream 10.0kb upstream 21017 true Chr03: 31508990-31530006 Phaseolus vulgaris
Phvul.003G127000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 31520007-31530006 Phaseolus vulgaris
Phvul.003G127000 10.0kb downstream 10.0kb downstream 21017 true Chr03: 31498990-31520006 Phaseolus vulgaris
Phvul.003G127000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 31498990-31508989 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304279 5265 Fabidae View MSA
124069910 5270 Rosid View MSA
123747253 5271 Pentapetalae View MSA
122794223 5272 Eudicot View MSA
122049046 5273 Angiosperm View MSA
121351376 5274 Embryophyte View MSA
123427544 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.67422 0.0 15.1101   Low
cufflinks 13.3705 0.0 44.7473    
cufflinks 37.1145 0.0 136.316    
cufflinks 6.55487 0.0 20.8535   Low
cufflinks 28.3245 0.0 94.3926    
cufflinks 37.4097 0.0 136.632 High  
cufflinks 29.0703 0.0 98.8605 High  
cufflinks 23.2157 0.0 87.6058    
cufflinks 25.9436 0.0 98.6155    
cufflinks 39.7637 0.0 147.335 High  
cufflinks 20.9365 0.0 75.4892    

0 Strain