Gene : Phvul.003G130200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR32378:SF9 - KERATIN-ASSOCIATED PROTEIN 29-1 Genomic Order:  1309
Name:  ? Phvul.003G130200 Secondary Identifier:  ? PAC:37147530
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G130200 0.5kb upstream 0.5kb upstream 3224 true Chr03: 32532287-32535510 Phaseolus vulgaris
Phvul.003G130200 0.5kb upstream 0.5kb upstream 500 false Chr03: 32532287-32532786 Phaseolus vulgaris
Phvul.003G130200 0.5kb downstream 0.5kb downstream 3224 true Chr03: 32532787-32536010 Phaseolus vulgaris
Phvul.003G130200 0.5kb downstream 0.5kb downstream 500 false Chr03: 32535511-32536010 Phaseolus vulgaris
Phvul.003G130200 1.0kb upstream 1.0kb upstream 3724 true Chr03: 32531787-32535510 Phaseolus vulgaris
Phvul.003G130200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 32531787-32532786 Phaseolus vulgaris
Phvul.003G130200 1.0kb downstream 1.0kb downstream 3724 true Chr03: 32532787-32536510 Phaseolus vulgaris
Phvul.003G130200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 32535511-32536510 Phaseolus vulgaris
Phvul.003G130200 2.0kb upstream 2.0kb upstream 4724 true Chr03: 32530787-32535510 Phaseolus vulgaris
Phvul.003G130200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 32530787-32532786 Phaseolus vulgaris
Phvul.003G130200 2.0kb downstream 2.0kb downstream 4724 true Chr03: 32532787-32537510 Phaseolus vulgaris
Phvul.003G130200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 32535511-32537510 Phaseolus vulgaris
Phvul.003G130200 5.0kb upstream 5.0kb upstream 7724 true Chr03: 32527787-32535510 Phaseolus vulgaris
Phvul.003G130200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 32527787-32532786 Phaseolus vulgaris
Phvul.003G130200 5.0kb downstream 5.0kb downstream 7724 true Chr03: 32532787-32540510 Phaseolus vulgaris
Phvul.003G130200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 32535511-32540510 Phaseolus vulgaris
Phvul.003G130200 10.0kb upstream 10.0kb upstream 12724 true Chr03: 32522787-32535510 Phaseolus vulgaris
Phvul.003G130200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 32522787-32532786 Phaseolus vulgaris
Phvul.003G130200 10.0kb downstream 10.0kb downstream 12724 true Chr03: 32532787-32545510 Phaseolus vulgaris
Phvul.003G130200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 32535511-32545510 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026325 5273 Angiosperm View MSA
122300178 5265 Fabidae View MSA
124071651 5270 Rosid View MSA
123750452 5271 Pentapetalae View MSA
122787622 5272 Eudicot View MSA
121296281 5274 Embryophyte View MSA
123334475 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.76627 0.0 9.139    
cufflinks 4.73036 0.0 14.8131    
cufflinks 0.252133 0.0 1.03335 Low Low
cufflinks 4.9842 0.0 15.4022    
cufflinks 4.39774 0.0 13.7321    
cufflinks 2.5226 0.0 8.47647    
cufflinks 0.652935 0.0 2.49768   Low
cufflinks 1.53666 0.0 5.46355    
cufflinks 1.5338 0.0 5.45944    
cufflinks 2.01442 0.0 6.93442    
cufflinks 8.05154 0.0 23.6839   High

0 Strain