Gene : Phvul.003G131800 P. vulgaris v2.1
Defline:  (1 of 10) PF08879//PF08880 - WRC (WRC) // QLQ (QLQ) Genomic Order:  1324
Name:  ? Phvul.003G131800 Secondary Identifier:  ? PAC:37146410
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G131800 0.5kb upstream 0.5kb upstream 3120 true Chr03: 32787950-32791069 Phaseolus vulgaris
Phvul.003G131800 0.5kb upstream 0.5kb upstream 500 false Chr03: 32787950-32788449 Phaseolus vulgaris
Phvul.003G131800 0.5kb downstream 0.5kb downstream 3120 true Chr03: 32788450-32791569 Phaseolus vulgaris
Phvul.003G131800 0.5kb downstream 0.5kb downstream 500 false Chr03: 32791070-32791569 Phaseolus vulgaris
Phvul.003G131800 1.0kb upstream 1.0kb upstream 3620 true Chr03: 32787450-32791069 Phaseolus vulgaris
Phvul.003G131800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 32787450-32788449 Phaseolus vulgaris
Phvul.003G131800 1.0kb downstream 1.0kb downstream 3620 true Chr03: 32788450-32792069 Phaseolus vulgaris
Phvul.003G131800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 32791070-32792069 Phaseolus vulgaris
Phvul.003G131800 2.0kb upstream 2.0kb upstream 4620 true Chr03: 32786450-32791069 Phaseolus vulgaris
Phvul.003G131800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 32786450-32788449 Phaseolus vulgaris
Phvul.003G131800 2.0kb downstream 2.0kb downstream 4620 true Chr03: 32788450-32793069 Phaseolus vulgaris
Phvul.003G131800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 32791070-32793069 Phaseolus vulgaris
Phvul.003G131800 5.0kb upstream 5.0kb upstream 7620 true Chr03: 32783450-32791069 Phaseolus vulgaris
Phvul.003G131800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 32783450-32788449 Phaseolus vulgaris
Phvul.003G131800 5.0kb downstream 5.0kb downstream 7620 true Chr03: 32788450-32796069 Phaseolus vulgaris
Phvul.003G131800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 32791070-32796069 Phaseolus vulgaris
Phvul.003G131800 10.0kb upstream 10.0kb upstream 12620 true Chr03: 32778450-32791069 Phaseolus vulgaris
Phvul.003G131800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 32778450-32788449 Phaseolus vulgaris
Phvul.003G131800 10.0kb downstream 10.0kb downstream 12620 true Chr03: 32788450-32801069 Phaseolus vulgaris
Phvul.003G131800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 32791070-32801069 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314016 5265 Fabidae View MSA
124074124 5270 Rosid View MSA
123750721 5271 Pentapetalae View MSA
122795468 5272 Eudicot View MSA
122049590 5273 Angiosperm View MSA
121349095 5274 Embryophyte View MSA
123381164 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.60233 0.0 5.27789    
cufflinks 2.28688 0.0 7.23853    
cufflinks 0.0342425 0.0 0.159936 Low Low
cufflinks 0.846276 0.0 2.98501    
cufflinks 1.64186 0.0 5.39889    
cufflinks 1.65393 0.0 5.42444    
cufflinks 0.238326 0.0 0.934061 Low  
cufflinks 0.162894 0.0 0.658292 Low  
cufflinks 0.163774 0.0 0.660989 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.28906 0.0 7.26732    

0 Strain