Gene : Phvul.003G114200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21495//PTHR21495:SF69 - NUCLEOPORIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1148
Name:  ? Phvul.003G114200 Secondary Identifier:  ? PAC:37146345
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G114200 0.5kb upstream 0.5kb upstream 2749 true Chr03: 29120419-29123167 Phaseolus vulgaris
Phvul.003G114200 0.5kb upstream 0.5kb upstream 500 false Chr03: 29120419-29120918 Phaseolus vulgaris
Phvul.003G114200 0.5kb downstream 0.5kb downstream 2749 true Chr03: 29120919-29123667 Phaseolus vulgaris
Phvul.003G114200 0.5kb downstream 0.5kb downstream 500 false Chr03: 29123168-29123667 Phaseolus vulgaris
Phvul.003G114200 1.0kb upstream 1.0kb upstream 3249 true Chr03: 29119919-29123167 Phaseolus vulgaris
Phvul.003G114200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 29119919-29120918 Phaseolus vulgaris
Phvul.003G114200 1.0kb downstream 1.0kb downstream 3249 true Chr03: 29120919-29124167 Phaseolus vulgaris
Phvul.003G114200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 29123168-29124167 Phaseolus vulgaris
Phvul.003G114200 2.0kb upstream 2.0kb upstream 4249 true Chr03: 29118919-29123167 Phaseolus vulgaris
Phvul.003G114200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 29118919-29120918 Phaseolus vulgaris
Phvul.003G114200 2.0kb downstream 2.0kb downstream 4249 true Chr03: 29120919-29125167 Phaseolus vulgaris
Phvul.003G114200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 29123168-29125167 Phaseolus vulgaris
Phvul.003G114200 5.0kb upstream 5.0kb upstream 7249 true Chr03: 29115919-29123167 Phaseolus vulgaris
Phvul.003G114200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 29115919-29120918 Phaseolus vulgaris
Phvul.003G114200 5.0kb downstream 5.0kb downstream 7249 true Chr03: 29120919-29128167 Phaseolus vulgaris
Phvul.003G114200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 29123168-29128167 Phaseolus vulgaris
Phvul.003G114200 10.0kb upstream 10.0kb upstream 12249 true Chr03: 29110919-29123167 Phaseolus vulgaris
Phvul.003G114200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 29110919-29120918 Phaseolus vulgaris
Phvul.003G114200 10.0kb downstream 10.0kb downstream 12249 true Chr03: 29120919-29133167 Phaseolus vulgaris
Phvul.003G114200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 29123168-29133167 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779389 5273 Angiosperm View MSA
122314276 5265 Fabidae View MSA
124069736 5270 Rosid View MSA
123742633 5271 Pentapetalae View MSA
122770334 5272 Eudicot View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.130261 0.0 0.5758 Low  
cufflinks 0.0408354 0.0 0.203957 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.112665 0.0 0.505639 Low  
cufflinks 7.39477 0.0 22.3173   High
cufflinks 6.07807 0.0 18.7301   High
cufflinks 5.8476 0.0 18.1499   High
cufflinks 0.113204 0.0 0.507632 Low  
cufflinks 0.266336 0.0 1.10564 Low  

0 Strain