Gene : Phvul.003G118800 P. vulgaris v2.1
Defline:  (1 of 1) 1.6.2.6//1.8.1.4 - Dihydrolipoyl dehydrogenase / Lipoyl dehydrogenase Genomic Order:  1194
Name:  ? Phvul.003G118800 Secondary Identifier:  ? PAC:37146653
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris GLYCLEAV-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-5046 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5084 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5173 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5464 Phaseolus vulgaris pathologic  
Pvulgaris PYRUVDEHYD-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G118800 0.5kb upstream 0.5kb upstream 3408 true Chr03: 30197489-30200896 Phaseolus vulgaris
Phvul.003G118800 0.5kb upstream 0.5kb upstream 500 false Chr03: 30200397-30200896 Phaseolus vulgaris
Phvul.003G118800 0.5kb downstream 0.5kb downstream 3408 true Chr03: 30196989-30200396 Phaseolus vulgaris
Phvul.003G118800 0.5kb downstream 0.5kb downstream 500 false Chr03: 30196989-30197488 Phaseolus vulgaris
Phvul.003G118800 1.0kb upstream 1.0kb upstream 3908 true Chr03: 30197489-30201396 Phaseolus vulgaris
Phvul.003G118800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 30200397-30201396 Phaseolus vulgaris
Phvul.003G118800 1.0kb downstream 1.0kb downstream 3908 true Chr03: 30196489-30200396 Phaseolus vulgaris
Phvul.003G118800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 30196489-30197488 Phaseolus vulgaris
Phvul.003G118800 2.0kb upstream 2.0kb upstream 4908 true Chr03: 30197489-30202396 Phaseolus vulgaris
Phvul.003G118800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 30200397-30202396 Phaseolus vulgaris
Phvul.003G118800 2.0kb downstream 2.0kb downstream 4908 true Chr03: 30195489-30200396 Phaseolus vulgaris
Phvul.003G118800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 30195489-30197488 Phaseolus vulgaris
Phvul.003G118800 5.0kb upstream 5.0kb upstream 7908 true Chr03: 30197489-30205396 Phaseolus vulgaris
Phvul.003G118800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 30200397-30205396 Phaseolus vulgaris
Phvul.003G118800 5.0kb downstream 5.0kb downstream 7908 true Chr03: 30192489-30200396 Phaseolus vulgaris
Phvul.003G118800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 30192489-30197488 Phaseolus vulgaris
Phvul.003G118800 10.0kb upstream 10.0kb upstream 12908 true Chr03: 30197489-30210396 Phaseolus vulgaris
Phvul.003G118800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 30200397-30210396 Phaseolus vulgaris
Phvul.003G118800 10.0kb downstream 10.0kb downstream 12908 true Chr03: 30187489-30200396 Phaseolus vulgaris
Phvul.003G118800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 30187489-30197488 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301262 5265 Fabidae View MSA
124063869 5270 Rosid View MSA
123749055 5271 Pentapetalae View MSA
122790901 5272 Eudicot View MSA
122041676 5273 Angiosperm View MSA
121345591 5274 Embryophyte View MSA
123424332 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 55.1067 0.0 149.232 High  
cufflinks 49.1773 0.0 131.861 High  
cufflinks 142.816 0.0 432.665 High High
cufflinks 114.716 0.0 334.384 High High
cufflinks 44.0717 0.0 116.764 High  
cufflinks 67.5471 0.0 186.529 High  
cufflinks 41.2953 0.0 109.353 High  
cufflinks 50.3366 0.0 135.347 High  
cufflinks 70.6634 0.0 196.045 High  
cufflinks 44.4853 0.0 118.257 High  
cufflinks 53.3826 0.0 143.877 High  

0 Strain