Gene : Phvul.003G172300 P. vulgaris v2.1
Defline:  (1 of 2) KOG0509 - Ankyrin repeat and DHHC-type Zn-finger domain containing proteins Genomic Order:  1747
Name:  ? Phvul.003G172300 Secondary Identifier:  ? PAC:37147815
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G172300 0.5kb upstream 0.5kb upstream 7881 true Chr03: 39439776-39447656 Phaseolus vulgaris
Phvul.003G172300 0.5kb upstream 0.5kb upstream 500 false Chr03: 39439776-39440275 Phaseolus vulgaris
Phvul.003G172300 0.5kb downstream 0.5kb downstream 7881 true Chr03: 39440276-39448156 Phaseolus vulgaris
Phvul.003G172300 0.5kb downstream 0.5kb downstream 500 false Chr03: 39447657-39448156 Phaseolus vulgaris
Phvul.003G172300 1.0kb upstream 1.0kb upstream 8381 true Chr03: 39439276-39447656 Phaseolus vulgaris
Phvul.003G172300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39439276-39440275 Phaseolus vulgaris
Phvul.003G172300 1.0kb downstream 1.0kb downstream 8381 true Chr03: 39440276-39448656 Phaseolus vulgaris
Phvul.003G172300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39447657-39448656 Phaseolus vulgaris
Phvul.003G172300 2.0kb upstream 2.0kb upstream 9381 true Chr03: 39438276-39447656 Phaseolus vulgaris
Phvul.003G172300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39438276-39440275 Phaseolus vulgaris
Phvul.003G172300 2.0kb downstream 2.0kb downstream 9381 true Chr03: 39440276-39449656 Phaseolus vulgaris
Phvul.003G172300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39447657-39449656 Phaseolus vulgaris
Phvul.003G172300 5.0kb upstream 5.0kb upstream 12381 true Chr03: 39435276-39447656 Phaseolus vulgaris
Phvul.003G172300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39435276-39440275 Phaseolus vulgaris
Phvul.003G172300 5.0kb downstream 5.0kb downstream 12381 true Chr03: 39440276-39452656 Phaseolus vulgaris
Phvul.003G172300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39447657-39452656 Phaseolus vulgaris
Phvul.003G172300 10.0kb upstream 10.0kb upstream 17381 true Chr03: 39430276-39447656 Phaseolus vulgaris
Phvul.003G172300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39430276-39440275 Phaseolus vulgaris
Phvul.003G172300 10.0kb downstream 10.0kb downstream 17381 true Chr03: 39440276-39457656 Phaseolus vulgaris
Phvul.003G172300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39447657-39457656 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305056 5265 Fabidae View MSA
124062916 5270 Rosid View MSA
123740504 5271 Pentapetalae View MSA
122791225 5272 Eudicot View MSA
122044218 5273 Angiosperm View MSA
121346065 5274 Embryophyte View MSA
123426336 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.5898 0.0 56.0293   Low
cufflinks 22.5997 0.0 58.6871    
cufflinks 29.8478 0.0 78.3533    
cufflinks 23.2895 0.0 60.4588    
cufflinks 28.2059 0.0 73.9385    
cufflinks 20.0255 0.0 51.8457   Low
cufflinks 27.3097 0.0 71.5224    
cufflinks 29.2148 0.0 76.7832 High  
cufflinks 32.0273 0.0 84.5787 High  
cufflinks 38.2968 0.0 102.495 High High
cufflinks 28.4577 0.0 74.5942    

0 Strain