Gene : Phvul.003G175400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10766:SF54 - ENDOMEMBRANE FAMILY PROTEIN 70 Genomic Order:  1778
Name:  ? Phvul.003G175400 Secondary Identifier:  ? PAC:37145377
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G175400 0.5kb upstream 0.5kb upstream 3038 true Chr03: 39721651-39724688 Phaseolus vulgaris
Phvul.003G175400 0.5kb upstream 0.5kb upstream 500 false Chr03: 39721651-39722150 Phaseolus vulgaris
Phvul.003G175400 0.5kb downstream 0.5kb downstream 3038 true Chr03: 39722151-39725188 Phaseolus vulgaris
Phvul.003G175400 0.5kb downstream 0.5kb downstream 500 false Chr03: 39724689-39725188 Phaseolus vulgaris
Phvul.003G175400 1.0kb upstream 1.0kb upstream 3538 true Chr03: 39721151-39724688 Phaseolus vulgaris
Phvul.003G175400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39721151-39722150 Phaseolus vulgaris
Phvul.003G175400 1.0kb downstream 1.0kb downstream 3538 true Chr03: 39722151-39725688 Phaseolus vulgaris
Phvul.003G175400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39724689-39725688 Phaseolus vulgaris
Phvul.003G175400 2.0kb upstream 2.0kb upstream 4538 true Chr03: 39720151-39724688 Phaseolus vulgaris
Phvul.003G175400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39720151-39722150 Phaseolus vulgaris
Phvul.003G175400 2.0kb downstream 2.0kb downstream 4538 true Chr03: 39722151-39726688 Phaseolus vulgaris
Phvul.003G175400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39724689-39726688 Phaseolus vulgaris
Phvul.003G175400 5.0kb upstream 5.0kb upstream 7538 true Chr03: 39717151-39724688 Phaseolus vulgaris
Phvul.003G175400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39717151-39722150 Phaseolus vulgaris
Phvul.003G175400 5.0kb downstream 5.0kb downstream 7538 true Chr03: 39722151-39729688 Phaseolus vulgaris
Phvul.003G175400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39724689-39729688 Phaseolus vulgaris
Phvul.003G175400 10.0kb upstream 10.0kb upstream 12538 true Chr03: 39712151-39724688 Phaseolus vulgaris
Phvul.003G175400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39712151-39722150 Phaseolus vulgaris
Phvul.003G175400 10.0kb downstream 10.0kb downstream 12538 true Chr03: 39722151-39734688 Phaseolus vulgaris
Phvul.003G175400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39724689-39734688 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299826 5265 Fabidae View MSA
124063523 5270 Rosid View MSA
123747213 5271 Pentapetalae View MSA
122787756 5272 Eudicot View MSA
122045331 5273 Angiosperm View MSA
121349188 5274 Embryophyte View MSA
123426870 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.06768 0.0 18.9579   Low
cufflinks 25.2051 0.0 65.5242    
cufflinks 21.3768 0.0 55.3557    
cufflinks 42.7041 0.0 113.797 High High
cufflinks 32.1655 0.0 84.4717    
cufflinks 27.6307 0.0 72.1112    
cufflinks 15.3214 0.0 39.6328    
cufflinks 9.65363 0.0 25.3576   Low
cufflinks 22.5096 0.0 58.3057    
cufflinks 10.8982 0.0 28.4714   Low
cufflinks 49.3194 0.0 133.668 High High

0 Strain