Gene : Phvul.003G173500 P. vulgaris v2.1
Defline:  (1 of 5) K09481 - protein transport protein SEC61 subunit beta (SEC61B, SBH2) Genomic Order:  1759
Name:  ? Phvul.003G173500 Secondary Identifier:  ? PAC:37147995
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G173500 0.5kb upstream 0.5kb upstream 1319 true Chr03: 39555331-39556649 Phaseolus vulgaris
Phvul.003G173500 0.5kb upstream 0.5kb upstream 500 false Chr03: 39555331-39555830 Phaseolus vulgaris
Phvul.003G173500 0.5kb downstream 0.5kb downstream 1319 true Chr03: 39555831-39557149 Phaseolus vulgaris
Phvul.003G173500 0.5kb downstream 0.5kb downstream 500 false Chr03: 39556650-39557149 Phaseolus vulgaris
Phvul.003G173500 1.0kb upstream 1.0kb upstream 1819 true Chr03: 39554831-39556649 Phaseolus vulgaris
Phvul.003G173500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39554831-39555830 Phaseolus vulgaris
Phvul.003G173500 1.0kb downstream 1.0kb downstream 1819 true Chr03: 39555831-39557649 Phaseolus vulgaris
Phvul.003G173500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39556650-39557649 Phaseolus vulgaris
Phvul.003G173500 2.0kb upstream 2.0kb upstream 2819 true Chr03: 39553831-39556649 Phaseolus vulgaris
Phvul.003G173500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39553831-39555830 Phaseolus vulgaris
Phvul.003G173500 2.0kb downstream 2.0kb downstream 2819 true Chr03: 39555831-39558649 Phaseolus vulgaris
Phvul.003G173500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39556650-39558649 Phaseolus vulgaris
Phvul.003G173500 5.0kb upstream 5.0kb upstream 5819 true Chr03: 39550831-39556649 Phaseolus vulgaris
Phvul.003G173500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39550831-39555830 Phaseolus vulgaris
Phvul.003G173500 5.0kb downstream 5.0kb downstream 5819 true Chr03: 39555831-39561649 Phaseolus vulgaris
Phvul.003G173500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39556650-39561649 Phaseolus vulgaris
Phvul.003G173500 10.0kb upstream 10.0kb upstream 10819 true Chr03: 39545831-39556649 Phaseolus vulgaris
Phvul.003G173500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39545831-39555830 Phaseolus vulgaris
Phvul.003G173500 10.0kb downstream 10.0kb downstream 10819 true Chr03: 39555831-39566649 Phaseolus vulgaris
Phvul.003G173500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39556650-39566649 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314120 5265 Fabidae View MSA
124074304 5270 Rosid View MSA
123751679 5271 Pentapetalae View MSA
122797593 5272 Eudicot View MSA
122044826 5273 Angiosperm View MSA
121346729 5274 Embryophyte View MSA
123426765 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2309 0.0 35.576   High
cufflinks 6.99907 0.0 21.8169    
cufflinks 5.35002 0.0 17.4108    
cufflinks 10.702 0.0 31.1974   High
cufflinks 5.7566 0.0 18.1858    
cufflinks 3.83392 0.0 12.8631    
cufflinks 2.61885 0.0 9.06874    
cufflinks 1.2685 0.0 4.7543   Low
cufflinks 3.8354 0.0 12.7332    
cufflinks 1.54149 0.0 5.61697   Low
cufflinks 5.01298 0.0 16.0596    

0 Strain