Gene : Phvul.003G179200 P. vulgaris v2.1
Defline:  (1 of 10) PF04759 - Protein of unknown function, DUF617 (DUF617) Genomic Order:  1816
Name:  ? Phvul.003G179200 Secondary Identifier:  ? PAC:37145007
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G179200 0.5kb upstream 0.5kb upstream 1875 true Chr03: 40239638-40241512 Phaseolus vulgaris
Phvul.003G179200 0.5kb upstream 0.5kb upstream 500 false Chr03: 40241013-40241512 Phaseolus vulgaris
Phvul.003G179200 0.5kb downstream 0.5kb downstream 1875 true Chr03: 40239138-40241012 Phaseolus vulgaris
Phvul.003G179200 0.5kb downstream 0.5kb downstream 500 false Chr03: 40239138-40239637 Phaseolus vulgaris
Phvul.003G179200 1.0kb upstream 1.0kb upstream 2375 true Chr03: 40239638-40242012 Phaseolus vulgaris
Phvul.003G179200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40241013-40242012 Phaseolus vulgaris
Phvul.003G179200 1.0kb downstream 1.0kb downstream 2375 true Chr03: 40238638-40241012 Phaseolus vulgaris
Phvul.003G179200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40238638-40239637 Phaseolus vulgaris
Phvul.003G179200 2.0kb upstream 2.0kb upstream 3375 true Chr03: 40239638-40243012 Phaseolus vulgaris
Phvul.003G179200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40241013-40243012 Phaseolus vulgaris
Phvul.003G179200 2.0kb downstream 2.0kb downstream 3375 true Chr03: 40237638-40241012 Phaseolus vulgaris
Phvul.003G179200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40237638-40239637 Phaseolus vulgaris
Phvul.003G179200 5.0kb upstream 5.0kb upstream 6375 true Chr03: 40239638-40246012 Phaseolus vulgaris
Phvul.003G179200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40241013-40246012 Phaseolus vulgaris
Phvul.003G179200 5.0kb downstream 5.0kb downstream 6375 true Chr03: 40234638-40241012 Phaseolus vulgaris
Phvul.003G179200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40234638-40239637 Phaseolus vulgaris
Phvul.003G179200 10.0kb upstream 10.0kb upstream 11375 true Chr03: 40239638-40251012 Phaseolus vulgaris
Phvul.003G179200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40241013-40251012 Phaseolus vulgaris
Phvul.003G179200 10.0kb downstream 10.0kb downstream 11375 true Chr03: 40229638-40241012 Phaseolus vulgaris
Phvul.003G179200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40229638-40239637 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310436 5265 Fabidae View MSA
124065422 5270 Rosid View MSA
123749266 5271 Pentapetalae View MSA
122791238 5272 Eudicot View MSA
122050120 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.56716 0.0 13.7284    
cufflinks 11.8128 0.0 32.1964    
cufflinks 3.36637 0.0 10.4349    
cufflinks 5.45719 0.0 16.0031    
cufflinks 9.31677 0.0 25.9182    
cufflinks 6.89319 0.0 19.7245    
cufflinks 5.0859 0.0 14.9399    
cufflinks 1.68271 0.0 5.63243   Low
cufflinks 6.99922 0.0 19.9141    
cufflinks 21.4982 0.0 56.233   High
cufflinks 16.1772 0.0 42.9623   High

0 Strain