Gene : Phvul.003G223000 P. vulgaris v2.1
Defline:  (1 of 8) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Genomic Order:  2261
Name:  ? Phvul.003G223000 Secondary Identifier:  ? PAC:37147630
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G223000 0.5kb upstream 0.5kb upstream 2813 true Chr03: 45266928-45269740 Phaseolus vulgaris
Phvul.003G223000 0.5kb upstream 0.5kb upstream 500 false Chr03: 45269241-45269740 Phaseolus vulgaris
Phvul.003G223000 0.5kb downstream 0.5kb downstream 2813 true Chr03: 45266428-45269240 Phaseolus vulgaris
Phvul.003G223000 0.5kb downstream 0.5kb downstream 500 false Chr03: 45266428-45266927 Phaseolus vulgaris
Phvul.003G223000 1.0kb upstream 1.0kb upstream 3313 true Chr03: 45266928-45270240 Phaseolus vulgaris
Phvul.003G223000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 45269241-45270240 Phaseolus vulgaris
Phvul.003G223000 1.0kb downstream 1.0kb downstream 3313 true Chr03: 45265928-45269240 Phaseolus vulgaris
Phvul.003G223000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 45265928-45266927 Phaseolus vulgaris
Phvul.003G223000 2.0kb upstream 2.0kb upstream 4313 true Chr03: 45266928-45271240 Phaseolus vulgaris
Phvul.003G223000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 45269241-45271240 Phaseolus vulgaris
Phvul.003G223000 2.0kb downstream 2.0kb downstream 4313 true Chr03: 45264928-45269240 Phaseolus vulgaris
Phvul.003G223000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 45264928-45266927 Phaseolus vulgaris
Phvul.003G223000 5.0kb upstream 5.0kb upstream 7313 true Chr03: 45266928-45274240 Phaseolus vulgaris
Phvul.003G223000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 45269241-45274240 Phaseolus vulgaris
Phvul.003G223000 5.0kb downstream 5.0kb downstream 7313 true Chr03: 45261928-45269240 Phaseolus vulgaris
Phvul.003G223000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 45261928-45266927 Phaseolus vulgaris
Phvul.003G223000 10.0kb upstream 10.0kb upstream 12313 true Chr03: 45266928-45279240 Phaseolus vulgaris
Phvul.003G223000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 45269241-45279240 Phaseolus vulgaris
Phvul.003G223000 10.0kb downstream 10.0kb downstream 12313 true Chr03: 45256928-45269240 Phaseolus vulgaris
Phvul.003G223000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 45256928-45266927 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306141 5265 Fabidae View MSA
124073267 5270 Rosid View MSA
123753733 5271 Pentapetalae View MSA
122792020 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.28 0.0 55.77    
cufflinks 25.1323 0.0 83.7081    
cufflinks 9.97146 0.0 37.8998   Low
cufflinks 28.2679 0.0 94.7634    
cufflinks 23.3959 0.0 79.5004    
cufflinks 13.4704 0.0 48.3643    
cufflinks 16.1237 0.0 56.217    
cufflinks 18.868 0.0 64.9341    
cufflinks 13.1908 0.0 47.5716    
cufflinks 47.5011 0.0 158.897 High High
cufflinks 25.4518 0.0 85.7597    

0 Strain