Gene : Phvul.003G214000 P. vulgaris v2.1
Genomic Order:  2162 Name:  ? Phvul.003G214000
Secondary Identifier:  ? PAC:37148351
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G214000 0.5kb upstream 0.5kb upstream 1915 true Chr03: 44071406-44073320 Phaseolus vulgaris
Phvul.003G214000 0.5kb upstream 0.5kb upstream 500 false Chr03: 44071406-44071905 Phaseolus vulgaris
Phvul.003G214000 0.5kb downstream 0.5kb downstream 1915 true Chr03: 44071906-44073820 Phaseolus vulgaris
Phvul.003G214000 0.5kb downstream 0.5kb downstream 500 false Chr03: 44073321-44073820 Phaseolus vulgaris
Phvul.003G214000 1.0kb upstream 1.0kb upstream 2415 true Chr03: 44070906-44073320 Phaseolus vulgaris
Phvul.003G214000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 44070906-44071905 Phaseolus vulgaris
Phvul.003G214000 1.0kb downstream 1.0kb downstream 2415 true Chr03: 44071906-44074320 Phaseolus vulgaris
Phvul.003G214000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 44073321-44074320 Phaseolus vulgaris
Phvul.003G214000 2.0kb upstream 2.0kb upstream 3415 true Chr03: 44069906-44073320 Phaseolus vulgaris
Phvul.003G214000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 44069906-44071905 Phaseolus vulgaris
Phvul.003G214000 2.0kb downstream 2.0kb downstream 3415 true Chr03: 44071906-44075320 Phaseolus vulgaris
Phvul.003G214000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 44073321-44075320 Phaseolus vulgaris
Phvul.003G214000 5.0kb upstream 5.0kb upstream 6415 true Chr03: 44066906-44073320 Phaseolus vulgaris
Phvul.003G214000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 44066906-44071905 Phaseolus vulgaris
Phvul.003G214000 5.0kb downstream 5.0kb downstream 6415 true Chr03: 44071906-44078320 Phaseolus vulgaris
Phvul.003G214000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 44073321-44078320 Phaseolus vulgaris
Phvul.003G214000 10.0kb upstream 10.0kb upstream 11415 true Chr03: 44061906-44073320 Phaseolus vulgaris
Phvul.003G214000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 44061906-44071905 Phaseolus vulgaris
Phvul.003G214000 10.0kb downstream 10.0kb downstream 11415 true Chr03: 44071906-44083320 Phaseolus vulgaris
Phvul.003G214000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 44073321-44083320 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305161 5265 Fabidae View MSA
124070880 5270 Rosid View MSA
123741769 5271 Pentapetalae View MSA
122791233 5272 Eudicot View MSA
122049706 5273 Angiosperm View MSA
121311553 5274 Embryophyte View MSA
123427523 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.41768 0.0 21.2844    
cufflinks 5.48552 0.0 16.2644    
cufflinks 11.8943 0.0 32.6287   High
cufflinks 11.62 0.0 32.2557   High
cufflinks 4.05308 0.0 12.5461    
cufflinks 6.85443 0.0 19.7973    
cufflinks 4.3173 0.0 13.1126    
cufflinks 4.44659 0.0 13.4297    
cufflinks 6.4708 0.0 18.7747    
cufflinks 2.50776 0.0 8.14543   Low
cufflinks 6.97213 0.0 20.2198    

0 Strain