Gene : Phvul.003G212700 P. vulgaris v2.1
Defline:  (1 of 180) PF00847 - AP2 domain (AP2) Genomic Order:  2149
Name:  ? Phvul.003G212700 Secondary Identifier:  ? PAC:37147257
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G212700 0.5kb upstream 0.5kb upstream 1037 true Chr03: 43904372-43905408 Phaseolus vulgaris
Phvul.003G212700 0.5kb upstream 0.5kb upstream 500 false Chr03: 43904372-43904871 Phaseolus vulgaris
Phvul.003G212700 0.5kb downstream 0.5kb downstream 1037 true Chr03: 43904872-43905908 Phaseolus vulgaris
Phvul.003G212700 0.5kb downstream 0.5kb downstream 500 false Chr03: 43905409-43905908 Phaseolus vulgaris
Phvul.003G212700 1.0kb upstream 1.0kb upstream 1537 true Chr03: 43903872-43905408 Phaseolus vulgaris
Phvul.003G212700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43903872-43904871 Phaseolus vulgaris
Phvul.003G212700 1.0kb downstream 1.0kb downstream 1537 true Chr03: 43904872-43906408 Phaseolus vulgaris
Phvul.003G212700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43905409-43906408 Phaseolus vulgaris
Phvul.003G212700 2.0kb upstream 2.0kb upstream 2537 true Chr03: 43902872-43905408 Phaseolus vulgaris
Phvul.003G212700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43902872-43904871 Phaseolus vulgaris
Phvul.003G212700 2.0kb downstream 2.0kb downstream 2537 true Chr03: 43904872-43907408 Phaseolus vulgaris
Phvul.003G212700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43905409-43907408 Phaseolus vulgaris
Phvul.003G212700 5.0kb upstream 5.0kb upstream 5537 true Chr03: 43899872-43905408 Phaseolus vulgaris
Phvul.003G212700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43899872-43904871 Phaseolus vulgaris
Phvul.003G212700 5.0kb downstream 5.0kb downstream 5537 true Chr03: 43904872-43910408 Phaseolus vulgaris
Phvul.003G212700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43905409-43910408 Phaseolus vulgaris
Phvul.003G212700 10.0kb upstream 10.0kb upstream 10537 true Chr03: 43894872-43905408 Phaseolus vulgaris
Phvul.003G212700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43894872-43904871 Phaseolus vulgaris
Phvul.003G212700 10.0kb downstream 10.0kb downstream 10537 true Chr03: 43904872-43915408 Phaseolus vulgaris
Phvul.003G212700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43905409-43915408 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303157 5265 Fabidae View MSA
124070637 5270 Rosid View MSA
123747343 5271 Pentapetalae View MSA
122787056 5272 Eudicot View MSA
122049572 5273 Angiosperm View MSA
121351578 5274 Embryophyte View MSA
123382234 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.299512 0.0 1.27516 Low  
cufflinks 0.118296 0.0 0.555302 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.247627 0.0 1.07467 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain