Gene : Phvul.003G207500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11669:SF3 - PROTEIN STICHEL-LIKE 2 Genomic Order:  2096
Name:  ? Phvul.003G207500 Secondary Identifier:  ? PAC:37147121
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G207500 0.5kb upstream 0.5kb upstream 5996 true Chr03: 43349506-43355501 Phaseolus vulgaris
Phvul.003G207500 0.5kb upstream 0.5kb upstream 500 false Chr03: 43349506-43350005 Phaseolus vulgaris
Phvul.003G207500 0.5kb downstream 0.5kb downstream 5996 true Chr03: 43350006-43356001 Phaseolus vulgaris
Phvul.003G207500 0.5kb downstream 0.5kb downstream 500 false Chr03: 43355502-43356001 Phaseolus vulgaris
Phvul.003G207500 1.0kb upstream 1.0kb upstream 6496 true Chr03: 43349006-43355501 Phaseolus vulgaris
Phvul.003G207500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43349006-43350005 Phaseolus vulgaris
Phvul.003G207500 1.0kb downstream 1.0kb downstream 6496 true Chr03: 43350006-43356501 Phaseolus vulgaris
Phvul.003G207500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43355502-43356501 Phaseolus vulgaris
Phvul.003G207500 2.0kb upstream 2.0kb upstream 7496 true Chr03: 43348006-43355501 Phaseolus vulgaris
Phvul.003G207500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43348006-43350005 Phaseolus vulgaris
Phvul.003G207500 2.0kb downstream 2.0kb downstream 7496 true Chr03: 43350006-43357501 Phaseolus vulgaris
Phvul.003G207500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43355502-43357501 Phaseolus vulgaris
Phvul.003G207500 5.0kb upstream 5.0kb upstream 10496 true Chr03: 43345006-43355501 Phaseolus vulgaris
Phvul.003G207500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43345006-43350005 Phaseolus vulgaris
Phvul.003G207500 5.0kb downstream 5.0kb downstream 10496 true Chr03: 43350006-43360501 Phaseolus vulgaris
Phvul.003G207500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43355502-43360501 Phaseolus vulgaris
Phvul.003G207500 10.0kb upstream 10.0kb upstream 15496 true Chr03: 43340006-43355501 Phaseolus vulgaris
Phvul.003G207500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43340006-43350005 Phaseolus vulgaris
Phvul.003G207500 10.0kb downstream 10.0kb downstream 15496 true Chr03: 43350006-43365501 Phaseolus vulgaris
Phvul.003G207500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43355502-43365501 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311123 5265 Fabidae View MSA
124063569 5270 Rosid View MSA
123738968 5271 Pentapetalae View MSA
122794041 5272 Eudicot View MSA
122048856 5273 Angiosperm View MSA
121350538 5274 Embryophyte View MSA
123381780 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.694405 0.0 2.31213    
cufflinks 0.982764 0.0 3.15084    
cufflinks 1.80612 0.0 5.37108    
cufflinks 1.70078 0.0 5.17268    
cufflinks 0.800973 0.0 2.64673    
cufflinks 5.3242 0.0 14.3245   High
cufflinks 0.699541 0.0 2.33249    
cufflinks 2.70121 0.0 7.69004   High
cufflinks 0.310383 0.0 1.13044 Low Low
cufflinks 1.74272 0.0 5.23586    
cufflinks 1.26454 0.0 3.96478    

0 Strain