Gene : Phvul.003G207300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24413:SF75 - BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 2 Genomic Order:  2094
Name:  ? Phvul.003G207300 Secondary Identifier:  ? PAC:37146260
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G207300 0.5kb upstream 0.5kb upstream 4279 true Chr03: 43289821-43294099 Phaseolus vulgaris
Phvul.003G207300 0.5kb upstream 0.5kb upstream 500 false Chr03: 43293600-43294099 Phaseolus vulgaris
Phvul.003G207300 0.5kb downstream 0.5kb downstream 4279 true Chr03: 43289321-43293599 Phaseolus vulgaris
Phvul.003G207300 0.5kb downstream 0.5kb downstream 500 false Chr03: 43289321-43289820 Phaseolus vulgaris
Phvul.003G207300 1.0kb upstream 1.0kb upstream 4779 true Chr03: 43289821-43294599 Phaseolus vulgaris
Phvul.003G207300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43293600-43294599 Phaseolus vulgaris
Phvul.003G207300 1.0kb downstream 1.0kb downstream 4779 true Chr03: 43288821-43293599 Phaseolus vulgaris
Phvul.003G207300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43288821-43289820 Phaseolus vulgaris
Phvul.003G207300 2.0kb upstream 2.0kb upstream 5779 true Chr03: 43289821-43295599 Phaseolus vulgaris
Phvul.003G207300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43293600-43295599 Phaseolus vulgaris
Phvul.003G207300 2.0kb downstream 2.0kb downstream 5779 true Chr03: 43287821-43293599 Phaseolus vulgaris
Phvul.003G207300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43287821-43289820 Phaseolus vulgaris
Phvul.003G207300 5.0kb upstream 5.0kb upstream 8779 true Chr03: 43289821-43298599 Phaseolus vulgaris
Phvul.003G207300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43293600-43298599 Phaseolus vulgaris
Phvul.003G207300 5.0kb downstream 5.0kb downstream 8779 true Chr03: 43284821-43293599 Phaseolus vulgaris
Phvul.003G207300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43284821-43289820 Phaseolus vulgaris
Phvul.003G207300 10.0kb upstream 10.0kb upstream 13779 true Chr03: 43289821-43303599 Phaseolus vulgaris
Phvul.003G207300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43293600-43303599 Phaseolus vulgaris
Phvul.003G207300 10.0kb downstream 10.0kb downstream 13779 true Chr03: 43279821-43293599 Phaseolus vulgaris
Phvul.003G207300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43279821-43289820 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303272 5265 Fabidae View MSA
124063231 5270 Rosid View MSA
123746557 5271 Pentapetalae View MSA
122796772 5272 Eudicot View MSA
122047166 5273 Angiosperm View MSA
121348143 5274 Embryophyte View MSA
123380742 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 118.163 0.0 341.174 High High
cufflinks 43.7562 0.0 114.855 High  
cufflinks 30.5704 0.0 79.1047    
cufflinks 22.4373 0.0 58.0052    
cufflinks 80.224 0.0 220.984 High High
cufflinks 13.0722 0.0 34.3925    
cufflinks 6.54597 0.0 18.0286   Low
cufflinks 11.6837 0.0 30.9917   Low
cufflinks 17.1217 0.0 44.3815    
cufflinks 49.8121 0.0 131.663 High  
cufflinks 44.9432 0.0 118.387 High  

0 Strain