Gene : Phvul.003G210200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12961 - CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 Genomic Order:  2124
Name:  ? Phvul.003G210200 Secondary Identifier:  ? PAC:37147653
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G210200 0.5kb upstream 0.5kb upstream 6372 true Chr03: 43622572-43628943 Phaseolus vulgaris
Phvul.003G210200 0.5kb upstream 0.5kb upstream 500 false Chr03: 43628444-43628943 Phaseolus vulgaris
Phvul.003G210200 0.5kb downstream 0.5kb downstream 6372 true Chr03: 43622072-43628443 Phaseolus vulgaris
Phvul.003G210200 0.5kb downstream 0.5kb downstream 500 false Chr03: 43622072-43622571 Phaseolus vulgaris
Phvul.003G210200 1.0kb upstream 1.0kb upstream 6872 true Chr03: 43622572-43629443 Phaseolus vulgaris
Phvul.003G210200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43628444-43629443 Phaseolus vulgaris
Phvul.003G210200 1.0kb downstream 1.0kb downstream 6872 true Chr03: 43621572-43628443 Phaseolus vulgaris
Phvul.003G210200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43621572-43622571 Phaseolus vulgaris
Phvul.003G210200 2.0kb upstream 2.0kb upstream 7872 true Chr03: 43622572-43630443 Phaseolus vulgaris
Phvul.003G210200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43628444-43630443 Phaseolus vulgaris
Phvul.003G210200 2.0kb downstream 2.0kb downstream 7872 true Chr03: 43620572-43628443 Phaseolus vulgaris
Phvul.003G210200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43620572-43622571 Phaseolus vulgaris
Phvul.003G210200 5.0kb upstream 5.0kb upstream 10872 true Chr03: 43622572-43633443 Phaseolus vulgaris
Phvul.003G210200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43628444-43633443 Phaseolus vulgaris
Phvul.003G210200 5.0kb downstream 5.0kb downstream 10872 true Chr03: 43617572-43628443 Phaseolus vulgaris
Phvul.003G210200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43617572-43622571 Phaseolus vulgaris
Phvul.003G210200 10.0kb upstream 10.0kb upstream 15872 true Chr03: 43622572-43638443 Phaseolus vulgaris
Phvul.003G210200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43628444-43638443 Phaseolus vulgaris
Phvul.003G210200 10.0kb downstream 10.0kb downstream 15872 true Chr03: 43612572-43628443 Phaseolus vulgaris
Phvul.003G210200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43612572-43622571 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303387 5265 Fabidae View MSA
124060440 5270 Rosid View MSA
123737600 5271 Pentapetalae View MSA
122792763 5272 Eudicot View MSA
122042143 5273 Angiosperm View MSA
121348897 5274 Embryophyte View MSA
123428033 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.21973 0.0 33.4109   Low
cufflinks 15.8723 0.0 58.3853    
cufflinks 19.9024 0.0 73.827   High
cufflinks 16.5183 0.0 59.7094    
cufflinks 15.4736 0.0 56.5143    
cufflinks 15.2105 0.0 54.6572    
cufflinks 15.2309 0.0 53.8222    
cufflinks 14.5159 0.0 40.573    
cufflinks 18.7672 0.0 66.4954    
cufflinks 19.4393 0.0 69.7627    
cufflinks 16.7579 0.0 62.5536    

0 Strain