Gene : Phvul.003G210000 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10891//PTHR10891:SF590 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2122
Name:  ? Phvul.003G210000 Secondary Identifier:  ? PAC:37146779
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G210000 0.5kb upstream 0.5kb upstream 1226 true Chr03: 43610426-43611651 Phaseolus vulgaris
Phvul.003G210000 0.5kb upstream 0.5kb upstream 500 false Chr03: 43610426-43610925 Phaseolus vulgaris
Phvul.003G210000 0.5kb downstream 0.5kb downstream 1226 true Chr03: 43610926-43612151 Phaseolus vulgaris
Phvul.003G210000 0.5kb downstream 0.5kb downstream 500 false Chr03: 43611652-43612151 Phaseolus vulgaris
Phvul.003G210000 1.0kb upstream 1.0kb upstream 1726 true Chr03: 43609926-43611651 Phaseolus vulgaris
Phvul.003G210000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43609926-43610925 Phaseolus vulgaris
Phvul.003G210000 1.0kb downstream 1.0kb downstream 1726 true Chr03: 43610926-43612651 Phaseolus vulgaris
Phvul.003G210000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43611652-43612651 Phaseolus vulgaris
Phvul.003G210000 2.0kb upstream 2.0kb upstream 2726 true Chr03: 43608926-43611651 Phaseolus vulgaris
Phvul.003G210000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43608926-43610925 Phaseolus vulgaris
Phvul.003G210000 2.0kb downstream 2.0kb downstream 2726 true Chr03: 43610926-43613651 Phaseolus vulgaris
Phvul.003G210000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43611652-43613651 Phaseolus vulgaris
Phvul.003G210000 5.0kb upstream 5.0kb upstream 5726 true Chr03: 43605926-43611651 Phaseolus vulgaris
Phvul.003G210000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43605926-43610925 Phaseolus vulgaris
Phvul.003G210000 5.0kb downstream 5.0kb downstream 5726 true Chr03: 43610926-43616651 Phaseolus vulgaris
Phvul.003G210000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43611652-43616651 Phaseolus vulgaris
Phvul.003G210000 10.0kb upstream 10.0kb upstream 10726 true Chr03: 43600926-43611651 Phaseolus vulgaris
Phvul.003G210000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43600926-43610925 Phaseolus vulgaris
Phvul.003G210000 10.0kb downstream 10.0kb downstream 10726 true Chr03: 43610926-43621651 Phaseolus vulgaris
Phvul.003G210000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43611652-43621651 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309759 5265 Fabidae View MSA
124071613 5270 Rosid View MSA
123747964 5271 Pentapetalae View MSA
122795822 5272 Eudicot View MSA
122046502 5273 Angiosperm View MSA
121351910 5274 Embryophyte View MSA
123382405 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.30064 0.0 7.85407    
cufflinks 0.693078 0.0 2.65008    
cufflinks 0.360306 0.0 1.45056 Low  
cufflinks 0.607184 0.0 2.37144    
cufflinks 2.29425 0.0 7.89956    
cufflinks 0.104439 0.0 0.468721 Low Low
cufflinks 34.8115 0.0 90.8823 High High
cufflinks 16.1691 0.0 44.6825   High
cufflinks 0.940158 0.0 3.50633    
cufflinks 72.8646 0.0 188.817 High High
cufflinks 0.908326 0.0 3.4005    

0 Strain