Gene : Phvul.003G211700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11669:SF5 - REPLICATION FACTOR C SUBUNIT 2 Genomic Order:  2139
Name:  ? Phvul.003G211700 Secondary Identifier:  ? PAC:37146067
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G211700 0.5kb upstream 0.5kb upstream 3867 true Chr03: 43795840-43799706 Phaseolus vulgaris
Phvul.003G211700 0.5kb upstream 0.5kb upstream 500 false Chr03: 43795840-43796339 Phaseolus vulgaris
Phvul.003G211700 0.5kb downstream 0.5kb downstream 3867 true Chr03: 43796340-43800206 Phaseolus vulgaris
Phvul.003G211700 0.5kb downstream 0.5kb downstream 500 false Chr03: 43799707-43800206 Phaseolus vulgaris
Phvul.003G211700 1.0kb upstream 1.0kb upstream 4367 true Chr03: 43795340-43799706 Phaseolus vulgaris
Phvul.003G211700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43795340-43796339 Phaseolus vulgaris
Phvul.003G211700 1.0kb downstream 1.0kb downstream 4367 true Chr03: 43796340-43800706 Phaseolus vulgaris
Phvul.003G211700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43799707-43800706 Phaseolus vulgaris
Phvul.003G211700 2.0kb upstream 2.0kb upstream 5367 true Chr03: 43794340-43799706 Phaseolus vulgaris
Phvul.003G211700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43794340-43796339 Phaseolus vulgaris
Phvul.003G211700 2.0kb downstream 2.0kb downstream 5367 true Chr03: 43796340-43801706 Phaseolus vulgaris
Phvul.003G211700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43799707-43801706 Phaseolus vulgaris
Phvul.003G211700 5.0kb upstream 5.0kb upstream 8367 true Chr03: 43791340-43799706 Phaseolus vulgaris
Phvul.003G211700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43791340-43796339 Phaseolus vulgaris
Phvul.003G211700 5.0kb downstream 5.0kb downstream 8367 true Chr03: 43796340-43804706 Phaseolus vulgaris
Phvul.003G211700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43799707-43804706 Phaseolus vulgaris
Phvul.003G211700 10.0kb upstream 10.0kb upstream 13367 true Chr03: 43786340-43799706 Phaseolus vulgaris
Phvul.003G211700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43786340-43796339 Phaseolus vulgaris
Phvul.003G211700 10.0kb downstream 10.0kb downstream 13367 true Chr03: 43796340-43809706 Phaseolus vulgaris
Phvul.003G211700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43799707-43809706 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307868 5265 Fabidae View MSA
124067480 5270 Rosid View MSA
123736933 5271 Pentapetalae View MSA
122797574 5272 Eudicot View MSA
122046702 5273 Angiosperm View MSA
121346724 5274 Embryophyte View MSA
123424586 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.04871 0.0 20.1866    
cufflinks 11.4928 0.0 31.4359   High
cufflinks 2.97867 0.0 9.38007   Low
cufflinks 6.40902 0.0 18.6261    
cufflinks 6.21995 0.0 18.119    
cufflinks 4.65725 0.0 13.9446   Low
cufflinks 8.64738 0.0 24.2615    
cufflinks 9.48845 0.0 26.3523    
cufflinks 9.68314 0.0 26.9207    
cufflinks 6.85999 0.0 19.7009    
cufflinks 6.73603 0.0 19.4418    

0 Strain