Gene : Phvul.003G195700 P. vulgaris v2.1
Defline:  (1 of 6) PTHR12374:SF26 - F25A4.19 PROTEIN Genomic Order:  1979
Name:  ? Phvul.003G195700 Secondary Identifier:  ? PAC:37144646
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G195700 0.5kb upstream 0.5kb upstream 2557 true Chr03: 41978538-41981094 Phaseolus vulgaris
Phvul.003G195700 0.5kb upstream 0.5kb upstream 500 false Chr03: 41980595-41981094 Phaseolus vulgaris
Phvul.003G195700 0.5kb downstream 0.5kb downstream 2557 true Chr03: 41978038-41980594 Phaseolus vulgaris
Phvul.003G195700 0.5kb downstream 0.5kb downstream 500 false Chr03: 41978038-41978537 Phaseolus vulgaris
Phvul.003G195700 1.0kb upstream 1.0kb upstream 3057 true Chr03: 41978538-41981594 Phaseolus vulgaris
Phvul.003G195700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41980595-41981594 Phaseolus vulgaris
Phvul.003G195700 1.0kb downstream 1.0kb downstream 3057 true Chr03: 41977538-41980594 Phaseolus vulgaris
Phvul.003G195700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41977538-41978537 Phaseolus vulgaris
Phvul.003G195700 2.0kb upstream 2.0kb upstream 4057 true Chr03: 41978538-41982594 Phaseolus vulgaris
Phvul.003G195700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41980595-41982594 Phaseolus vulgaris
Phvul.003G195700 2.0kb downstream 2.0kb downstream 4057 true Chr03: 41976538-41980594 Phaseolus vulgaris
Phvul.003G195700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41976538-41978537 Phaseolus vulgaris
Phvul.003G195700 5.0kb upstream 5.0kb upstream 7057 true Chr03: 41978538-41985594 Phaseolus vulgaris
Phvul.003G195700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41980595-41985594 Phaseolus vulgaris
Phvul.003G195700 5.0kb downstream 5.0kb downstream 7057 true Chr03: 41973538-41980594 Phaseolus vulgaris
Phvul.003G195700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41973538-41978537 Phaseolus vulgaris
Phvul.003G195700 10.0kb upstream 10.0kb upstream 12057 true Chr03: 41978538-41990594 Phaseolus vulgaris
Phvul.003G195700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41980595-41990594 Phaseolus vulgaris
Phvul.003G195700 10.0kb downstream 10.0kb downstream 12057 true Chr03: 41968538-41980594 Phaseolus vulgaris
Phvul.003G195700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41968538-41978537 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310492 5265 Fabidae View MSA
124069217 5270 Rosid View MSA
123738697 5271 Pentapetalae View MSA
122794974 5272 Eudicot View MSA
122050347 5273 Angiosperm View MSA
121350990 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 187.301 0.0 554.953 High  
cufflinks 100.896 0.0 278.028 High  
cufflinks 163.612 0.0 476.012 High  
cufflinks 90.4269 0.0 247.028 High  
cufflinks 243.97 0.0 753.58 High High
cufflinks 64.5004 0.0 170.853 High  
cufflinks 65.2008 0.0 173.631 High  
cufflinks 32.8941 0.0 85.0449 High Low
cufflinks 153.06 0.0 444.939 High  
cufflinks 168.383 0.0 492.685 High  
cufflinks 96.1565 0.0 264.022 High  

0 Strain