Gene : Phvul.003G192500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10024:SF201 - C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  1947
Name:  ? Phvul.003G192500 Secondary Identifier:  ? PAC:37148323
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G192500 0.5kb upstream 0.5kb upstream 4948 true Chr03: 41650019-41654966 Phaseolus vulgaris
Phvul.003G192500 0.5kb upstream 0.5kb upstream 500 false Chr03: 41650019-41650518 Phaseolus vulgaris
Phvul.003G192500 0.5kb downstream 0.5kb downstream 4948 true Chr03: 41650519-41655466 Phaseolus vulgaris
Phvul.003G192500 0.5kb downstream 0.5kb downstream 500 false Chr03: 41654967-41655466 Phaseolus vulgaris
Phvul.003G192500 1.0kb upstream 1.0kb upstream 5448 true Chr03: 41649519-41654966 Phaseolus vulgaris
Phvul.003G192500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41649519-41650518 Phaseolus vulgaris
Phvul.003G192500 1.0kb downstream 1.0kb downstream 5448 true Chr03: 41650519-41655966 Phaseolus vulgaris
Phvul.003G192500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41654967-41655966 Phaseolus vulgaris
Phvul.003G192500 2.0kb upstream 2.0kb upstream 6448 true Chr03: 41648519-41654966 Phaseolus vulgaris
Phvul.003G192500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41648519-41650518 Phaseolus vulgaris
Phvul.003G192500 2.0kb downstream 2.0kb downstream 6448 true Chr03: 41650519-41656966 Phaseolus vulgaris
Phvul.003G192500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41654967-41656966 Phaseolus vulgaris
Phvul.003G192500 5.0kb upstream 5.0kb upstream 9448 true Chr03: 41645519-41654966 Phaseolus vulgaris
Phvul.003G192500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41645519-41650518 Phaseolus vulgaris
Phvul.003G192500 5.0kb downstream 5.0kb downstream 9448 true Chr03: 41650519-41659966 Phaseolus vulgaris
Phvul.003G192500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41654967-41659966 Phaseolus vulgaris
Phvul.003G192500 10.0kb upstream 10.0kb upstream 14448 true Chr03: 41640519-41654966 Phaseolus vulgaris
Phvul.003G192500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41640519-41650518 Phaseolus vulgaris
Phvul.003G192500 10.0kb downstream 10.0kb downstream 14448 true Chr03: 41650519-41664966 Phaseolus vulgaris
Phvul.003G192500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41654967-41664966 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308779 5265 Fabidae View MSA
124065357 5270 Rosid View MSA
123748968 5271 Pentapetalae View MSA
122790054 5272 Eudicot View MSA
122049348 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.19366 0.0 6.05591   Low
cufflinks 7.29134 0.0 18.8479   High
cufflinks 4.60059 0.0 12.0588    
cufflinks 5.60158 0.0 14.5375    
cufflinks 8.43361 0.0 21.8161   High
cufflinks 4.22236 0.0 11.0864    
cufflinks 5.18028 0.0 13.4394    
cufflinks 4.55189 0.0 11.8869    
cufflinks 4.443 0.0 11.5947    
cufflinks 5.37864 0.0 13.9762    
cufflinks 6.61572 0.0 17.1068    

0 Strain