Gene : Phvul.003G180200 P. vulgaris v2.1
Defline:  (1 of 4) PF11833 - Protein of unknown function (DUF3353) (DUF3353) Genomic Order:  1826
Name:  ? Phvul.003G180200 Secondary Identifier:  ? PAC:37147390
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G180200 0.5kb upstream 0.5kb upstream 3845 true Chr03: 40311991-40315835 Phaseolus vulgaris
Phvul.003G180200 0.5kb upstream 0.5kb upstream 500 false Chr03: 40311991-40312490 Phaseolus vulgaris
Phvul.003G180200 0.5kb downstream 0.5kb downstream 3845 true Chr03: 40312491-40316335 Phaseolus vulgaris
Phvul.003G180200 0.5kb downstream 0.5kb downstream 500 false Chr03: 40315836-40316335 Phaseolus vulgaris
Phvul.003G180200 1.0kb upstream 1.0kb upstream 4345 true Chr03: 40311491-40315835 Phaseolus vulgaris
Phvul.003G180200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40311491-40312490 Phaseolus vulgaris
Phvul.003G180200 1.0kb downstream 1.0kb downstream 4345 true Chr03: 40312491-40316835 Phaseolus vulgaris
Phvul.003G180200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40315836-40316835 Phaseolus vulgaris
Phvul.003G180200 2.0kb upstream 2.0kb upstream 5345 true Chr03: 40310491-40315835 Phaseolus vulgaris
Phvul.003G180200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40310491-40312490 Phaseolus vulgaris
Phvul.003G180200 2.0kb downstream 2.0kb downstream 5345 true Chr03: 40312491-40317835 Phaseolus vulgaris
Phvul.003G180200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40315836-40317835 Phaseolus vulgaris
Phvul.003G180200 5.0kb upstream 5.0kb upstream 8345 true Chr03: 40307491-40315835 Phaseolus vulgaris
Phvul.003G180200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40307491-40312490 Phaseolus vulgaris
Phvul.003G180200 5.0kb downstream 5.0kb downstream 8345 true Chr03: 40312491-40320835 Phaseolus vulgaris
Phvul.003G180200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40315836-40320835 Phaseolus vulgaris
Phvul.003G180200 10.0kb upstream 10.0kb upstream 13345 true Chr03: 40302491-40315835 Phaseolus vulgaris
Phvul.003G180200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40302491-40312490 Phaseolus vulgaris
Phvul.003G180200 10.0kb downstream 10.0kb downstream 13345 true Chr03: 40312491-40325835 Phaseolus vulgaris
Phvul.003G180200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40315836-40325835 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308193 5265 Fabidae View MSA
124060931 5270 Rosid View MSA
123736448 5271 Pentapetalae View MSA
122790363 5272 Eudicot View MSA
122050900 5273 Angiosperm View MSA
121343809 5274 Embryophyte View MSA
123427732 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 62.7801 0.0 163.221 High High
cufflinks 32.9305 0.0 85.5776 High  
cufflinks 70.8074 0.0 184.726 High High
cufflinks 27.2655 0.0 71.5593    
cufflinks 19.9261 0.0 53.4873    
cufflinks 53.6473 0.0 138.814 High High
cufflinks 11.6819 0.0 32.6604   Low
cufflinks 15.7698 0.0 42.7447    
cufflinks 12.6749 0.0 35.3428   Low
cufflinks 19.4319 0.0 52.0309    
cufflinks 17.7011 0.0 47.9113    

0 Strain