Gene : Phvul.003G184900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11972//PTHR11972:SF76 - NADPH OXIDASE // SUBFAMILY NOT NAMED Genomic Order:  1873
Name:  ? Phvul.003G184900 Secondary Identifier:  ? PAC:37147547
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G184900 0.5kb upstream 0.5kb upstream 6802 true Chr03: 40805236-40812037 Phaseolus vulgaris
Phvul.003G184900 0.5kb upstream 0.5kb upstream 500 false Chr03: 40805236-40805735 Phaseolus vulgaris
Phvul.003G184900 0.5kb downstream 0.5kb downstream 6802 true Chr03: 40805736-40812537 Phaseolus vulgaris
Phvul.003G184900 0.5kb downstream 0.5kb downstream 500 false Chr03: 40812038-40812537 Phaseolus vulgaris
Phvul.003G184900 1.0kb upstream 1.0kb upstream 7302 true Chr03: 40804736-40812037 Phaseolus vulgaris
Phvul.003G184900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40804736-40805735 Phaseolus vulgaris
Phvul.003G184900 1.0kb downstream 1.0kb downstream 7302 true Chr03: 40805736-40813037 Phaseolus vulgaris
Phvul.003G184900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40812038-40813037 Phaseolus vulgaris
Phvul.003G184900 2.0kb upstream 2.0kb upstream 8302 true Chr03: 40803736-40812037 Phaseolus vulgaris
Phvul.003G184900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40803736-40805735 Phaseolus vulgaris
Phvul.003G184900 2.0kb downstream 2.0kb downstream 8302 true Chr03: 40805736-40814037 Phaseolus vulgaris
Phvul.003G184900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40812038-40814037 Phaseolus vulgaris
Phvul.003G184900 5.0kb upstream 5.0kb upstream 11302 true Chr03: 40800736-40812037 Phaseolus vulgaris
Phvul.003G184900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40800736-40805735 Phaseolus vulgaris
Phvul.003G184900 5.0kb downstream 5.0kb downstream 11302 true Chr03: 40805736-40817037 Phaseolus vulgaris
Phvul.003G184900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40812038-40817037 Phaseolus vulgaris
Phvul.003G184900 10.0kb upstream 10.0kb upstream 16302 true Chr03: 40795736-40812037 Phaseolus vulgaris
Phvul.003G184900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40795736-40805735 Phaseolus vulgaris
Phvul.003G184900 10.0kb downstream 10.0kb downstream 16302 true Chr03: 40805736-40822037 Phaseolus vulgaris
Phvul.003G184900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40812038-40822037 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300900 5265 Fabidae View MSA
124037612 5270 Rosid View MSA
123743379 5271 Pentapetalae View MSA
122794303 5272 Eudicot View MSA
122049600 5273 Angiosperm View MSA
121311497 5274 Embryophyte View MSA
123427915 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.257631 0.0 0.963763 Low Low
cufflinks 1.32496 0.0 4.17853    
cufflinks 0.532435 0.0 1.85709 Low  
cufflinks 0.221687 0.0 0.841862 Low Low
cufflinks 4.89188 0.0 13.5093    
cufflinks 0.737436 0.0 2.48355    
cufflinks 16.795 0.0 43.4184   High
cufflinks 12.1798 0.0 31.5617   High
cufflinks 26.4866 0.0 69.3052   High
cufflinks 1.35152 0.0 4.25867    
cufflinks 3.47578 0.0 9.88472    

0 Strain