Gene : Phvul.003G242700 P. vulgaris v2.1
Defline:  (1 of 4) PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Genomic Order:  2462
Name:  ? Phvul.003G242700 Secondary Identifier:  ? PAC:37145674
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G242700 0.5kb upstream 0.5kb upstream 1023 true Chr03: 47794277-47795299 Phaseolus vulgaris
Phvul.003G242700 0.5kb upstream 0.5kb upstream 500 false Chr03: 47794277-47794776 Phaseolus vulgaris
Phvul.003G242700 0.5kb downstream 0.5kb downstream 1023 true Chr03: 47794777-47795799 Phaseolus vulgaris
Phvul.003G242700 0.5kb downstream 0.5kb downstream 500 false Chr03: 47795300-47795799 Phaseolus vulgaris
Phvul.003G242700 1.0kb upstream 1.0kb upstream 1523 true Chr03: 47793777-47795299 Phaseolus vulgaris
Phvul.003G242700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 47793777-47794776 Phaseolus vulgaris
Phvul.003G242700 1.0kb downstream 1.0kb downstream 1523 true Chr03: 47794777-47796299 Phaseolus vulgaris
Phvul.003G242700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 47795300-47796299 Phaseolus vulgaris
Phvul.003G242700 2.0kb upstream 2.0kb upstream 2523 true Chr03: 47792777-47795299 Phaseolus vulgaris
Phvul.003G242700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 47792777-47794776 Phaseolus vulgaris
Phvul.003G242700 2.0kb downstream 2.0kb downstream 2523 true Chr03: 47794777-47797299 Phaseolus vulgaris
Phvul.003G242700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 47795300-47797299 Phaseolus vulgaris
Phvul.003G242700 5.0kb upstream 5.0kb upstream 5523 true Chr03: 47789777-47795299 Phaseolus vulgaris
Phvul.003G242700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 47789777-47794776 Phaseolus vulgaris
Phvul.003G242700 5.0kb downstream 5.0kb downstream 5523 true Chr03: 47794777-47800299 Phaseolus vulgaris
Phvul.003G242700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 47795300-47800299 Phaseolus vulgaris
Phvul.003G242700 10.0kb upstream 10.0kb upstream 10523 true Chr03: 47784777-47795299 Phaseolus vulgaris
Phvul.003G242700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 47784777-47794776 Phaseolus vulgaris
Phvul.003G242700 10.0kb downstream 10.0kb downstream 10523 true Chr03: 47794777-47805299 Phaseolus vulgaris
Phvul.003G242700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 47795300-47805299 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122251460 5265 Fabidae Singleton cluster - no MSA
124074768 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.761626 0.0 3.80403    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain