Gene : Phvul.003G243300 P. vulgaris v2.1
Defline:  (1 of 3) PTHR24361:SF334 - MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 19-RELATED Genomic Order:  2468
Name:  ? Phvul.003G243300 Secondary Identifier:  ? PAC:37147825
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G243300 0.5kb upstream 0.5kb upstream 1535 true Chr03: 47868010-47869544 Phaseolus vulgaris
Phvul.003G243300 0.5kb upstream 0.5kb upstream 500 false Chr03: 47869045-47869544 Phaseolus vulgaris
Phvul.003G243300 0.5kb downstream 0.5kb downstream 1535 true Chr03: 47867510-47869044 Phaseolus vulgaris
Phvul.003G243300 0.5kb downstream 0.5kb downstream 500 false Chr03: 47867510-47868009 Phaseolus vulgaris
Phvul.003G243300 1.0kb upstream 1.0kb upstream 2035 true Chr03: 47868010-47870044 Phaseolus vulgaris
Phvul.003G243300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 47869045-47870044 Phaseolus vulgaris
Phvul.003G243300 1.0kb downstream 1.0kb downstream 2035 true Chr03: 47867010-47869044 Phaseolus vulgaris
Phvul.003G243300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 47867010-47868009 Phaseolus vulgaris
Phvul.003G243300 2.0kb upstream 2.0kb upstream 3035 true Chr03: 47868010-47871044 Phaseolus vulgaris
Phvul.003G243300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 47869045-47871044 Phaseolus vulgaris
Phvul.003G243300 2.0kb downstream 2.0kb downstream 3035 true Chr03: 47866010-47869044 Phaseolus vulgaris
Phvul.003G243300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 47866010-47868009 Phaseolus vulgaris
Phvul.003G243300 5.0kb upstream 5.0kb upstream 6035 true Chr03: 47868010-47874044 Phaseolus vulgaris
Phvul.003G243300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 47869045-47874044 Phaseolus vulgaris
Phvul.003G243300 5.0kb downstream 5.0kb downstream 6035 true Chr03: 47863010-47869044 Phaseolus vulgaris
Phvul.003G243300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 47863010-47868009 Phaseolus vulgaris
Phvul.003G243300 10.0kb upstream 10.0kb upstream 11035 true Chr03: 47868010-47879044 Phaseolus vulgaris
Phvul.003G243300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 47869045-47879044 Phaseolus vulgaris
Phvul.003G243300 10.0kb downstream 10.0kb downstream 11035 true Chr03: 47858010-47869044 Phaseolus vulgaris
Phvul.003G243300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 47858010-47868009 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310266 5265 Fabidae View MSA
124073880 5270 Rosid View MSA
123753521 5271 Pentapetalae View MSA
122797928 5272 Eudicot View MSA
122051434 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.45222 0.0 10.526    
cufflinks 1.1277 0.0 3.92689   Low
cufflinks 2.41841 0.0 7.75342    
cufflinks 1.75885 0.0 5.85294    
cufflinks 4.99943 0.0 14.6979   High
cufflinks 1.33981 0.0 4.57791   Low
cufflinks 4.72892 0.0 13.859    
cufflinks 2.13549 0.0 6.89041    
cufflinks 4.70694 0.0 13.8539    
cufflinks 2.21739 0.0 7.15567    
cufflinks 5.87636 0.0 16.9184   High

0 Strain