Gene : Phvul.003G245200 P. vulgaris v2.1
Genomic Order:  2491 Name:  ? Phvul.003G245200
Secondary Identifier:  ? PAC:37147929
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G245200 0.5kb upstream 0.5kb upstream 1416 true Chr03: 48179374-48180789 Phaseolus vulgaris
Phvul.003G245200 0.5kb upstream 0.5kb upstream 500 false Chr03: 48179374-48179873 Phaseolus vulgaris
Phvul.003G245200 0.5kb downstream 0.5kb downstream 1416 true Chr03: 48179874-48181289 Phaseolus vulgaris
Phvul.003G245200 0.5kb downstream 0.5kb downstream 500 false Chr03: 48180790-48181289 Phaseolus vulgaris
Phvul.003G245200 1.0kb upstream 1.0kb upstream 1916 true Chr03: 48178874-48180789 Phaseolus vulgaris
Phvul.003G245200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 48178874-48179873 Phaseolus vulgaris
Phvul.003G245200 1.0kb downstream 1.0kb downstream 1916 true Chr03: 48179874-48181789 Phaseolus vulgaris
Phvul.003G245200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 48180790-48181789 Phaseolus vulgaris
Phvul.003G245200 2.0kb upstream 2.0kb upstream 2916 true Chr03: 48177874-48180789 Phaseolus vulgaris
Phvul.003G245200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 48177874-48179873 Phaseolus vulgaris
Phvul.003G245200 2.0kb downstream 2.0kb downstream 2916 true Chr03: 48179874-48182789 Phaseolus vulgaris
Phvul.003G245200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 48180790-48182789 Phaseolus vulgaris
Phvul.003G245200 5.0kb upstream 5.0kb upstream 5916 true Chr03: 48174874-48180789 Phaseolus vulgaris
Phvul.003G245200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 48174874-48179873 Phaseolus vulgaris
Phvul.003G245200 5.0kb downstream 5.0kb downstream 5916 true Chr03: 48179874-48185789 Phaseolus vulgaris
Phvul.003G245200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 48180790-48185789 Phaseolus vulgaris
Phvul.003G245200 10.0kb upstream 10.0kb upstream 10916 true Chr03: 48169874-48180789 Phaseolus vulgaris
Phvul.003G245200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 48169874-48179873 Phaseolus vulgaris
Phvul.003G245200 10.0kb downstream 10.0kb downstream 10916 true Chr03: 48179874-48190789 Phaseolus vulgaris
Phvul.003G245200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 48180790-48190789 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254247 5265 Fabidae View MSA
124072573 5270 Rosid View MSA
123748035 5271 Pentapetalae View MSA
122772407 5272 Eudicot View MSA
122044935 5273 Angiosperm View MSA
121310364 5274 Embryophyte View MSA
123347866 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.14828 0.0 7.5251    
cufflinks 0.536567 0.0 2.11764    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.351229 0.0 1.43332 Low  
cufflinks 0.776682 0.0 2.99877    
cufflinks 0.728767 0.0 2.8053    
cufflinks 29.1678 0.0 77.623 High High
cufflinks 42.9328 0.0 111.629 High High
cufflinks 2.1235 0.0 7.42735    
cufflinks 0.0254327 0.0 0.136037 Low Low
cufflinks 31.8874 0.0 84.8622   High

0 Strain