Gene : Phvul.003G296300 P. vulgaris v2.1
Defline:  (1 of 1) K14767 - U3 small nucleolar RNA-associated protein 3 (UTP3, SAS10) Genomic Order:  3011
Name:  ? Phvul.003G296300 Secondary Identifier:  ? PAC:37145623
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G296300 0.5kb upstream 0.5kb upstream 7690 true Chr03: 53308698-53316387 Phaseolus vulgaris
Phvul.003G296300 0.5kb upstream 0.5kb upstream 500 false Chr03: 53308698-53309197 Phaseolus vulgaris
Phvul.003G296300 0.5kb downstream 0.5kb downstream 7690 true Chr03: 53309198-53316887 Phaseolus vulgaris
Phvul.003G296300 0.5kb downstream 0.5kb downstream 500 false Chr03: 53316388-53316887 Phaseolus vulgaris
Phvul.003G296300 1.0kb upstream 1.0kb upstream 8190 true Chr03: 53308198-53316387 Phaseolus vulgaris
Phvul.003G296300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 53308198-53309197 Phaseolus vulgaris
Phvul.003G296300 1.0kb downstream 1.0kb downstream 8190 true Chr03: 53309198-53317387 Phaseolus vulgaris
Phvul.003G296300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 53316388-53317387 Phaseolus vulgaris
Phvul.003G296300 2.0kb upstream 2.0kb upstream 9190 true Chr03: 53307198-53316387 Phaseolus vulgaris
Phvul.003G296300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 53307198-53309197 Phaseolus vulgaris
Phvul.003G296300 2.0kb downstream 2.0kb downstream 9190 true Chr03: 53309198-53318387 Phaseolus vulgaris
Phvul.003G296300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 53316388-53318387 Phaseolus vulgaris
Phvul.003G296300 5.0kb upstream 5.0kb upstream 12190 true Chr03: 53304198-53316387 Phaseolus vulgaris
Phvul.003G296300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 53304198-53309197 Phaseolus vulgaris
Phvul.003G296300 5.0kb downstream 5.0kb downstream 12190 true Chr03: 53309198-53321387 Phaseolus vulgaris
Phvul.003G296300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 53316388-53321387 Phaseolus vulgaris
Phvul.003G296300 10.0kb upstream 10.0kb upstream 17190 true Chr03: 53299198-53316387 Phaseolus vulgaris
Phvul.003G296300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 53299198-53309197 Phaseolus vulgaris
Phvul.003G296300 10.0kb downstream 10.0kb downstream 17190 true Chr03: 53309198-53326387 Phaseolus vulgaris
Phvul.003G296300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 53316388-53326387 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027842 5273 Angiosperm View MSA
122303276 5265 Fabidae View MSA
124067196 5270 Rosid View MSA
123744956 5271 Pentapetalae View MSA
122793458 5272 Eudicot View MSA
121344490 5274 Embryophyte View MSA
123424280 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.8905 0.0 13.3044   Low
cufflinks 10.1068 0.0 26.3035    
cufflinks 6.14769 0.0 16.4377    
cufflinks 4.84354 0.0 13.35   Low
cufflinks 5.70204 0.0 15.5411    
cufflinks 4.53598 0.0 12.4317   Low
cufflinks 9.01881 0.0 23.5361    
cufflinks 12.2053 0.0 31.5699   High
cufflinks 10.1604 0.0 26.4139    
cufflinks 9.8591 0.0 25.725    
cufflinks 6.69886 0.0 17.9375    

0 Strain