Gene : Phvul.003G285400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24089:SF341 - MITOCHONDRIAL CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN Genomic Order:  2901
Name:  ? Phvul.003G285400 Secondary Identifier:  ? PAC:37145918
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G285400 0.5kb upstream 0.5kb upstream 3422 true Chr03: 52312118-52315539 Phaseolus vulgaris
Phvul.003G285400 0.5kb upstream 0.5kb upstream 500 false Chr03: 52312118-52312617 Phaseolus vulgaris
Phvul.003G285400 0.5kb downstream 0.5kb downstream 3422 true Chr03: 52312618-52316039 Phaseolus vulgaris
Phvul.003G285400 0.5kb downstream 0.5kb downstream 500 false Chr03: 52315540-52316039 Phaseolus vulgaris
Phvul.003G285400 1.0kb upstream 1.0kb upstream 3922 true Chr03: 52311618-52315539 Phaseolus vulgaris
Phvul.003G285400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 52311618-52312617 Phaseolus vulgaris
Phvul.003G285400 1.0kb downstream 1.0kb downstream 3922 true Chr03: 52312618-52316539 Phaseolus vulgaris
Phvul.003G285400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 52315540-52316539 Phaseolus vulgaris
Phvul.003G285400 2.0kb upstream 2.0kb upstream 4922 true Chr03: 52310618-52315539 Phaseolus vulgaris
Phvul.003G285400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 52310618-52312617 Phaseolus vulgaris
Phvul.003G285400 2.0kb downstream 2.0kb downstream 4922 true Chr03: 52312618-52317539 Phaseolus vulgaris
Phvul.003G285400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 52315540-52317539 Phaseolus vulgaris
Phvul.003G285400 5.0kb upstream 5.0kb upstream 7922 true Chr03: 52307618-52315539 Phaseolus vulgaris
Phvul.003G285400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 52307618-52312617 Phaseolus vulgaris
Phvul.003G285400 5.0kb downstream 5.0kb downstream 7922 true Chr03: 52312618-52320539 Phaseolus vulgaris
Phvul.003G285400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 52315540-52320539 Phaseolus vulgaris
Phvul.003G285400 10.0kb upstream 10.0kb upstream 12922 true Chr03: 52302618-52315539 Phaseolus vulgaris
Phvul.003G285400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 52302618-52312617 Phaseolus vulgaris
Phvul.003G285400 10.0kb downstream 10.0kb downstream 12922 true Chr03: 52312618-52325539 Phaseolus vulgaris
Phvul.003G285400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 52315540-52325539 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311394 5265 Fabidae View MSA
124065581 5270 Rosid View MSA
123738655 5271 Pentapetalae View MSA
122791854 5272 Eudicot View MSA
122045796 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121349185 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.6172 0.0 58.5192    
cufflinks 9.49206 0.0 25.7713    
cufflinks 141.304 0.0 413.473 High High
cufflinks 13.2775 0.0 35.2063    
cufflinks 9.39929 0.0 25.5416    
cufflinks 56.3575 0.0 149.625 High High
cufflinks 7.37103 0.0 20.4231    
cufflinks 7.39811 0.0 20.4673    
cufflinks 14.144 0.0 37.3192    
cufflinks 4.68521 0.0 13.6219   Low
cufflinks 8.50888 0.0 23.378    

0 Strain