Gene : Phvul.003G283800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10891:SF290 - CALCIUM-BINDING PROTEIN CML18-RELATED Genomic Order:  2885
Name:  ? Phvul.003G283800 Secondary Identifier:  ? PAC:37145828
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G283800 0.5kb upstream 0.5kb upstream 1333 true Chr03: 52152499-52153831 Phaseolus vulgaris
Phvul.003G283800 0.5kb upstream 0.5kb upstream 500 false Chr03: 52153332-52153831 Phaseolus vulgaris
Phvul.003G283800 0.5kb downstream 0.5kb downstream 1333 true Chr03: 52151999-52153331 Phaseolus vulgaris
Phvul.003G283800 0.5kb downstream 0.5kb downstream 500 false Chr03: 52151999-52152498 Phaseolus vulgaris
Phvul.003G283800 1.0kb upstream 1.0kb upstream 1833 true Chr03: 52152499-52154331 Phaseolus vulgaris
Phvul.003G283800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 52153332-52154331 Phaseolus vulgaris
Phvul.003G283800 1.0kb downstream 1.0kb downstream 1833 true Chr03: 52151499-52153331 Phaseolus vulgaris
Phvul.003G283800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 52151499-52152498 Phaseolus vulgaris
Phvul.003G283800 2.0kb upstream 2.0kb upstream 2833 true Chr03: 52152499-52155331 Phaseolus vulgaris
Phvul.003G283800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 52153332-52155331 Phaseolus vulgaris
Phvul.003G283800 2.0kb downstream 2.0kb downstream 2833 true Chr03: 52150499-52153331 Phaseolus vulgaris
Phvul.003G283800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 52150499-52152498 Phaseolus vulgaris
Phvul.003G283800 5.0kb upstream 5.0kb upstream 5833 true Chr03: 52152499-52158331 Phaseolus vulgaris
Phvul.003G283800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 52153332-52158331 Phaseolus vulgaris
Phvul.003G283800 5.0kb downstream 5.0kb downstream 5833 true Chr03: 52147499-52153331 Phaseolus vulgaris
Phvul.003G283800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 52147499-52152498 Phaseolus vulgaris
Phvul.003G283800 10.0kb upstream 10.0kb upstream 10833 true Chr03: 52152499-52163331 Phaseolus vulgaris
Phvul.003G283800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 52153332-52163331 Phaseolus vulgaris
Phvul.003G283800 10.0kb downstream 10.0kb downstream 10833 true Chr03: 52142499-52153331 Phaseolus vulgaris
Phvul.003G283800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 52142499-52152498 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304885 5265 Fabidae View MSA
124071205 5270 Rosid View MSA
123741143 5271 Pentapetalae View MSA
122785978 5272 Eudicot View MSA
122047727 5273 Angiosperm View MSA
121350745 5274 Embryophyte View MSA
123381869 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.4639 0.0 8.25864    
cufflinks 1.33402 0.0 4.78511   Low
cufflinks 1.90237 0.0 6.63529    
cufflinks 2.16786 0.0 7.30389    
cufflinks 2.58039 0.0 8.61616    
cufflinks 2.43234 0.0 8.19165    
cufflinks 3.61114 0.0 11.5184    
cufflinks 2.62737 0.0 8.78224    
cufflinks 4.32129 0.0 13.4696   High
cufflinks 0.684671 0.0 2.60177   Low
cufflinks 3.74709 0.0 11.9456    

0 Strain