Gene : Phvul.003G282600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23322:SF6 - UBX DOMAIN-CONTAINING PROTEIN 7 Genomic Order:  2873
Name:  ? Phvul.003G282600 Secondary Identifier:  ? PAC:37147160
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G282600 0.5kb upstream 0.5kb upstream 11083 true Chr03: 51995047-52006129 Phaseolus vulgaris
Phvul.003G282600 0.5kb upstream 0.5kb upstream 500 false Chr03: 52005630-52006129 Phaseolus vulgaris
Phvul.003G282600 0.5kb downstream 0.5kb downstream 11083 true Chr03: 51994547-52005629 Phaseolus vulgaris
Phvul.003G282600 0.5kb downstream 0.5kb downstream 500 false Chr03: 51994547-51995046 Phaseolus vulgaris
Phvul.003G282600 1.0kb upstream 1.0kb upstream 11583 true Chr03: 51995047-52006629 Phaseolus vulgaris
Phvul.003G282600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 52005630-52006629 Phaseolus vulgaris
Phvul.003G282600 1.0kb downstream 1.0kb downstream 11583 true Chr03: 51994047-52005629 Phaseolus vulgaris
Phvul.003G282600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 51994047-51995046 Phaseolus vulgaris
Phvul.003G282600 2.0kb upstream 2.0kb upstream 12583 true Chr03: 51995047-52007629 Phaseolus vulgaris
Phvul.003G282600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 52005630-52007629 Phaseolus vulgaris
Phvul.003G282600 2.0kb downstream 2.0kb downstream 12583 true Chr03: 51993047-52005629 Phaseolus vulgaris
Phvul.003G282600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 51993047-51995046 Phaseolus vulgaris
Phvul.003G282600 5.0kb upstream 5.0kb upstream 15583 true Chr03: 51995047-52010629 Phaseolus vulgaris
Phvul.003G282600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 52005630-52010629 Phaseolus vulgaris
Phvul.003G282600 5.0kb downstream 5.0kb downstream 15583 true Chr03: 51990047-52005629 Phaseolus vulgaris
Phvul.003G282600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 51990047-51995046 Phaseolus vulgaris
Phvul.003G282600 10.0kb upstream 10.0kb upstream 20583 true Chr03: 51995047-52015629 Phaseolus vulgaris
Phvul.003G282600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 52005630-52015629 Phaseolus vulgaris
Phvul.003G282600 10.0kb downstream 10.0kb downstream 20583 true Chr03: 51985047-52005629 Phaseolus vulgaris
Phvul.003G282600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 51985047-51995046 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308217 5265 Fabidae View MSA
124065724 5270 Rosid View MSA
123738098 5271 Pentapetalae View MSA
122792262 5272 Eudicot View MSA
122046461 5273 Angiosperm View MSA
121343946 5274 Embryophyte View MSA
123424965 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.8569 0.0 51.4243    
cufflinks 20.2255 0.0 52.3381    
cufflinks 15.1429 0.0 39.4933   Low
cufflinks 14.4274 0.0 37.7525   Low
cufflinks 19.5663 0.0 50.7024    
cufflinks 16.0683 0.0 41.7885    
cufflinks 17.5168 0.0 45.4155    
cufflinks 15.2669 0.0 39.7526   Low
cufflinks 20.513 0.0 53.0508    
cufflinks 26.1688 0.0 67.6581   High
cufflinks 20.9046 0.0 54.0918    

0 Strain