Gene : Phvul.003G264400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11607:SF18 - ALPHA-MANNOSIDASE Genomic Order:  2691
Name:  ? Phvul.003G264400 Secondary Identifier:  ? PAC:37147438
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G264400 0.5kb upstream 0.5kb upstream 9268 true Chr03: 50309151-50318418 Phaseolus vulgaris
Phvul.003G264400 0.5kb upstream 0.5kb upstream 500 false Chr03: 50309151-50309650 Phaseolus vulgaris
Phvul.003G264400 0.5kb downstream 0.5kb downstream 9268 true Chr03: 50309651-50318918 Phaseolus vulgaris
Phvul.003G264400 0.5kb downstream 0.5kb downstream 500 false Chr03: 50318419-50318918 Phaseolus vulgaris
Phvul.003G264400 1.0kb upstream 1.0kb upstream 9768 true Chr03: 50308651-50318418 Phaseolus vulgaris
Phvul.003G264400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50308651-50309650 Phaseolus vulgaris
Phvul.003G264400 1.0kb downstream 1.0kb downstream 9768 true Chr03: 50309651-50319418 Phaseolus vulgaris
Phvul.003G264400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50318419-50319418 Phaseolus vulgaris
Phvul.003G264400 2.0kb upstream 2.0kb upstream 10768 true Chr03: 50307651-50318418 Phaseolus vulgaris
Phvul.003G264400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50307651-50309650 Phaseolus vulgaris
Phvul.003G264400 2.0kb downstream 2.0kb downstream 10768 true Chr03: 50309651-50320418 Phaseolus vulgaris
Phvul.003G264400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50318419-50320418 Phaseolus vulgaris
Phvul.003G264400 5.0kb upstream 5.0kb upstream 13768 true Chr03: 50304651-50318418 Phaseolus vulgaris
Phvul.003G264400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50304651-50309650 Phaseolus vulgaris
Phvul.003G264400 5.0kb downstream 5.0kb downstream 13768 true Chr03: 50309651-50323418 Phaseolus vulgaris
Phvul.003G264400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50318419-50323418 Phaseolus vulgaris
Phvul.003G264400 10.0kb upstream 10.0kb upstream 18768 true Chr03: 50299651-50318418 Phaseolus vulgaris
Phvul.003G264400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50299651-50309650 Phaseolus vulgaris
Phvul.003G264400 10.0kb downstream 10.0kb downstream 18768 true Chr03: 50309651-50328418 Phaseolus vulgaris
Phvul.003G264400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50318419-50328418 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304562 5265 Fabidae View MSA
124065265 5270 Rosid View MSA
123745536 5271 Pentapetalae View MSA
122791640 5272 Eudicot View MSA
122044684 5273 Angiosperm View MSA
121351343 5274 Embryophyte View MSA
123424648 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.454094 0.0 1.59062    
cufflinks 1.2611 0.0 3.94235    
cufflinks 15.0586 0.0 38.9392   High
cufflinks 1.62559 0.0 4.97157    
cufflinks 3.42864 0.0 9.6729    
cufflinks 12.4986 0.0 32.3232   High
cufflinks 1.93421 0.0 5.76158    
cufflinks 0.853892 0.0 2.77828    
cufflinks 5.13915 0.0 13.9254    
cufflinks 0.0849927 0.0 0.343389 Low Low
cufflinks 2.45853 0.0 7.16301    

0 Strain