Gene : Phvul.003G263900 P. vulgaris v2.1
Defline:  (1 of 5) PTHR22601//PTHR22601:SF12 - ISP4 LIKE PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2686
Name:  ? Phvul.003G263900 Secondary Identifier:  ? PAC:37146649
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G263900 0.5kb upstream 0.5kb upstream 5070 true Chr03: 50284496-50289565 Phaseolus vulgaris
Phvul.003G263900 0.5kb upstream 0.5kb upstream 500 false Chr03: 50289066-50289565 Phaseolus vulgaris
Phvul.003G263900 0.5kb downstream 0.5kb downstream 5070 true Chr03: 50283996-50289065 Phaseolus vulgaris
Phvul.003G263900 0.5kb downstream 0.5kb downstream 500 false Chr03: 50283996-50284495 Phaseolus vulgaris
Phvul.003G263900 1.0kb upstream 1.0kb upstream 5570 true Chr03: 50284496-50290065 Phaseolus vulgaris
Phvul.003G263900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50289066-50290065 Phaseolus vulgaris
Phvul.003G263900 1.0kb downstream 1.0kb downstream 5570 true Chr03: 50283496-50289065 Phaseolus vulgaris
Phvul.003G263900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50283496-50284495 Phaseolus vulgaris
Phvul.003G263900 2.0kb upstream 2.0kb upstream 6570 true Chr03: 50284496-50291065 Phaseolus vulgaris
Phvul.003G263900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50289066-50291065 Phaseolus vulgaris
Phvul.003G263900 2.0kb downstream 2.0kb downstream 6570 true Chr03: 50282496-50289065 Phaseolus vulgaris
Phvul.003G263900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50282496-50284495 Phaseolus vulgaris
Phvul.003G263900 5.0kb upstream 5.0kb upstream 9570 true Chr03: 50284496-50294065 Phaseolus vulgaris
Phvul.003G263900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50289066-50294065 Phaseolus vulgaris
Phvul.003G263900 5.0kb downstream 5.0kb downstream 9570 true Chr03: 50279496-50289065 Phaseolus vulgaris
Phvul.003G263900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50279496-50284495 Phaseolus vulgaris
Phvul.003G263900 10.0kb upstream 10.0kb upstream 14570 true Chr03: 50284496-50299065 Phaseolus vulgaris
Phvul.003G263900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50289066-50299065 Phaseolus vulgaris
Phvul.003G263900 10.0kb downstream 10.0kb downstream 14570 true Chr03: 50274496-50289065 Phaseolus vulgaris
Phvul.003G263900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50274496-50284495 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303018 5265 Fabidae View MSA
124073714 5270 Rosid View MSA
123750200 5271 Pentapetalae View MSA
122797569 5272 Eudicot View MSA
122049856 5273 Angiosperm View MSA
121351141 5274 Embryophyte View MSA
123382023 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.65853 0.0 5.13149    
cufflinks 0.50622 0.0 1.78732   Low
cufflinks 7.12643 0.0 19.0941    
cufflinks 2.06635 0.0 6.24079    
cufflinks 4.5348 0.0 12.6092    
cufflinks 1.21663 0.0 3.89872    
cufflinks 6.5783 0.0 17.6762    
cufflinks 7.34976 0.0 19.5779   High
cufflinks 8.1391 0.0 21.569   High
cufflinks 1.36715 0.0 4.31996    
cufflinks 3.12806 0.0 9.00333    

0 Strain