Gene : Phvul.003G246900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31003//PTHR31003:SF2 - MYB FAMILY TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Genomic Order:  2509
Name:  ? Phvul.003G246900 Secondary Identifier:  ? PAC:37147741
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G246900 0.5kb upstream 0.5kb upstream 3154 true Chr03: 48369362-48372515 Phaseolus vulgaris
Phvul.003G246900 0.5kb upstream 0.5kb upstream 500 false Chr03: 48372016-48372515 Phaseolus vulgaris
Phvul.003G246900 0.5kb downstream 0.5kb downstream 3154 true Chr03: 48368862-48372015 Phaseolus vulgaris
Phvul.003G246900 0.5kb downstream 0.5kb downstream 500 false Chr03: 48368862-48369361 Phaseolus vulgaris
Phvul.003G246900 1.0kb upstream 1.0kb upstream 3654 true Chr03: 48369362-48373015 Phaseolus vulgaris
Phvul.003G246900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 48372016-48373015 Phaseolus vulgaris
Phvul.003G246900 1.0kb downstream 1.0kb downstream 3654 true Chr03: 48368362-48372015 Phaseolus vulgaris
Phvul.003G246900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 48368362-48369361 Phaseolus vulgaris
Phvul.003G246900 2.0kb upstream 2.0kb upstream 4654 true Chr03: 48369362-48374015 Phaseolus vulgaris
Phvul.003G246900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 48372016-48374015 Phaseolus vulgaris
Phvul.003G246900 2.0kb downstream 2.0kb downstream 4654 true Chr03: 48367362-48372015 Phaseolus vulgaris
Phvul.003G246900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 48367362-48369361 Phaseolus vulgaris
Phvul.003G246900 5.0kb upstream 5.0kb upstream 7654 true Chr03: 48369362-48377015 Phaseolus vulgaris
Phvul.003G246900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 48372016-48377015 Phaseolus vulgaris
Phvul.003G246900 5.0kb downstream 5.0kb downstream 7654 true Chr03: 48364362-48372015 Phaseolus vulgaris
Phvul.003G246900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 48364362-48369361 Phaseolus vulgaris
Phvul.003G246900 10.0kb upstream 10.0kb upstream 12654 true Chr03: 48369362-48382015 Phaseolus vulgaris
Phvul.003G246900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 48372016-48382015 Phaseolus vulgaris
Phvul.003G246900 10.0kb downstream 10.0kb downstream 12654 true Chr03: 48359362-48372015 Phaseolus vulgaris
Phvul.003G246900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 48359362-48369361 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312255 5265 Fabidae View MSA
124066907 5270 Rosid View MSA
123742212 5271 Pentapetalae View MSA
122792121 5272 Eudicot View MSA
122049766 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.74638 0.0 7.75037    
cufflinks 1.79102 0.0 8.09389    
cufflinks 9.04384 0.0 31.6109   High
cufflinks 0.203365 0.0 0.805094 Low Low
cufflinks 3.32068 0.0 12.8467    
cufflinks 0.790249 0.0 4.41247    
cufflinks 0.56561 0.0 2.5219    
cufflinks 0.121054 0.0 0.496576 Low Low
cufflinks 0.771535 0.0 3.25678    
cufflinks 6.34081 0.0 24.1258   High
cufflinks 0.778738 0.0 3.43454    

0 Strain