Gene : Phvul.003G252300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12320:SF16 - PROTEIN PHOSPHATASE 2C 80-RELATED Genomic Order:  2570
Name:  ? Phvul.003G252300 Secondary Identifier:  ? PAC:37148060
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G252300 0.5kb upstream 0.5kb upstream 9477 true Chr03: 49149039-49158515 Phaseolus vulgaris
Phvul.003G252300 0.5kb upstream 0.5kb upstream 500 false Chr03: 49158016-49158515 Phaseolus vulgaris
Phvul.003G252300 0.5kb downstream 0.5kb downstream 9477 true Chr03: 49148539-49158015 Phaseolus vulgaris
Phvul.003G252300 0.5kb downstream 0.5kb downstream 500 false Chr03: 49148539-49149038 Phaseolus vulgaris
Phvul.003G252300 1.0kb upstream 1.0kb upstream 9977 true Chr03: 49149039-49159015 Phaseolus vulgaris
Phvul.003G252300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 49158016-49159015 Phaseolus vulgaris
Phvul.003G252300 1.0kb downstream 1.0kb downstream 9977 true Chr03: 49148039-49158015 Phaseolus vulgaris
Phvul.003G252300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 49148039-49149038 Phaseolus vulgaris
Phvul.003G252300 2.0kb upstream 2.0kb upstream 10977 true Chr03: 49149039-49160015 Phaseolus vulgaris
Phvul.003G252300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 49158016-49160015 Phaseolus vulgaris
Phvul.003G252300 2.0kb downstream 2.0kb downstream 10977 true Chr03: 49147039-49158015 Phaseolus vulgaris
Phvul.003G252300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 49147039-49149038 Phaseolus vulgaris
Phvul.003G252300 5.0kb upstream 5.0kb upstream 13977 true Chr03: 49149039-49163015 Phaseolus vulgaris
Phvul.003G252300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 49158016-49163015 Phaseolus vulgaris
Phvul.003G252300 5.0kb downstream 5.0kb downstream 13977 true Chr03: 49144039-49158015 Phaseolus vulgaris
Phvul.003G252300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 49144039-49149038 Phaseolus vulgaris
Phvul.003G252300 10.0kb upstream 10.0kb upstream 18977 true Chr03: 49149039-49168015 Phaseolus vulgaris
Phvul.003G252300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 49158016-49168015 Phaseolus vulgaris
Phvul.003G252300 10.0kb downstream 10.0kb downstream 18977 true Chr03: 49139039-49158015 Phaseolus vulgaris
Phvul.003G252300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 49139039-49149038 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314824 5265 Fabidae View MSA
124074928 5270 Rosid View MSA
123743389 5271 Pentapetalae View MSA
122796886 5272 Eudicot View MSA
122043108 5273 Angiosperm View MSA
121351334 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.4249 0.0 45.9796    
cufflinks 17.0319 0.0 56.9161    
cufflinks 53.6269 0.0 188.897 High High
cufflinks 10.4223 0.0 37.0087    
cufflinks 10.0338 0.0 35.8437    
cufflinks 25.7629 0.0 84.4848   High
cufflinks 4.8097 0.0 17.8914   Low
cufflinks 6.41222 0.0 25.6951    
cufflinks 4.64283 0.0 17.3073   Low
cufflinks 18.7413 0.0 62.3856    
cufflinks 9.4555 0.0 34.8186    

0 Strain