Gene : Phvul.007G018400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10938//PTHR10938:SF2 - TRANSLATION INITIATION FACTOR IF-3 // SUBFAMILY NOT NAMED Genomic Order:  181
Name:  ? Phvul.007G018400 Secondary Identifier:  ? PAC:37165932
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G018400 0.5kb upstream 0.5kb upstream 5977 true Chr07: 1273746-1279722 Phaseolus vulgaris
Phvul.007G018400 0.5kb upstream 0.5kb upstream 500 false Chr07: 1273746-1274245 Phaseolus vulgaris
Phvul.007G018400 0.5kb downstream 0.5kb downstream 5977 true Chr07: 1274246-1280222 Phaseolus vulgaris
Phvul.007G018400 0.5kb downstream 0.5kb downstream 500 false Chr07: 1279723-1280222 Phaseolus vulgaris
Phvul.007G018400 1.0kb upstream 1.0kb upstream 6477 true Chr07: 1273246-1279722 Phaseolus vulgaris
Phvul.007G018400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1273246-1274245 Phaseolus vulgaris
Phvul.007G018400 1.0kb downstream 1.0kb downstream 6477 true Chr07: 1274246-1280722 Phaseolus vulgaris
Phvul.007G018400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1279723-1280722 Phaseolus vulgaris
Phvul.007G018400 2.0kb upstream 2.0kb upstream 7477 true Chr07: 1272246-1279722 Phaseolus vulgaris
Phvul.007G018400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1272246-1274245 Phaseolus vulgaris
Phvul.007G018400 2.0kb downstream 2.0kb downstream 7477 true Chr07: 1274246-1281722 Phaseolus vulgaris
Phvul.007G018400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1279723-1281722 Phaseolus vulgaris
Phvul.007G018400 5.0kb upstream 5.0kb upstream 10477 true Chr07: 1269246-1279722 Phaseolus vulgaris
Phvul.007G018400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1269246-1274245 Phaseolus vulgaris
Phvul.007G018400 5.0kb downstream 5.0kb downstream 10477 true Chr07: 1274246-1284722 Phaseolus vulgaris
Phvul.007G018400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1279723-1284722 Phaseolus vulgaris
Phvul.007G018400 10.0kb upstream 10.0kb upstream 15477 true Chr07: 1264246-1279722 Phaseolus vulgaris
Phvul.007G018400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1264246-1274245 Phaseolus vulgaris
Phvul.007G018400 10.0kb downstream 10.0kb downstream 15477 true Chr07: 1274246-1289722 Phaseolus vulgaris
Phvul.007G018400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1279723-1289722 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307717 5265 Fabidae View MSA
124064425 5270 Rosid View MSA
123743196 5271 Pentapetalae View MSA
122770560 5272 Eudicot View MSA
122049946 5273 Angiosperm View MSA
121349179 5274 Embryophyte View MSA
123425847 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.73754 0.0 18.3096    
cufflinks 8.90701 0.0 23.6995    
cufflinks 8.15053 0.0 21.8077    
cufflinks 6.96488 0.0 18.9855    
cufflinks 6.54058 0.0 17.9356   Low
cufflinks 8.75174 0.0 23.3011    
cufflinks 9.0902 0.0 24.1006    
cufflinks 9.63193 0.0 25.3795    
cufflinks 8.64711 0.0 23.019    
cufflinks 15.6214 0.0 40.4853   High
cufflinks 6.80413 0.0 18.5762    

0 Strain