Gene : Phvul.004G072400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32409:SF3 - MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED Genomic Order:  759
Name:  ? Phvul.004G072400 Secondary Identifier:  ? PAC:37162424
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G072400 0.5kb upstream 0.5kb upstream 4435 true Chr04: 11732614-11737048 Phaseolus vulgaris
Phvul.004G072400 0.5kb upstream 0.5kb upstream 500 false Chr04: 11736549-11737048 Phaseolus vulgaris
Phvul.004G072400 0.5kb downstream 0.5kb downstream 4435 true Chr04: 11732114-11736548 Phaseolus vulgaris
Phvul.004G072400 0.5kb downstream 0.5kb downstream 500 false Chr04: 11732114-11732613 Phaseolus vulgaris
Phvul.004G072400 1.0kb upstream 1.0kb upstream 4935 true Chr04: 11732614-11737548 Phaseolus vulgaris
Phvul.004G072400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 11736549-11737548 Phaseolus vulgaris
Phvul.004G072400 1.0kb downstream 1.0kb downstream 4935 true Chr04: 11731614-11736548 Phaseolus vulgaris
Phvul.004G072400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 11731614-11732613 Phaseolus vulgaris
Phvul.004G072400 2.0kb upstream 2.0kb upstream 5935 true Chr04: 11732614-11738548 Phaseolus vulgaris
Phvul.004G072400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 11736549-11738548 Phaseolus vulgaris
Phvul.004G072400 2.0kb downstream 2.0kb downstream 5935 true Chr04: 11730614-11736548 Phaseolus vulgaris
Phvul.004G072400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 11730614-11732613 Phaseolus vulgaris
Phvul.004G072400 5.0kb upstream 5.0kb upstream 8935 true Chr04: 11732614-11741548 Phaseolus vulgaris
Phvul.004G072400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 11736549-11741548 Phaseolus vulgaris
Phvul.004G072400 5.0kb downstream 5.0kb downstream 8935 true Chr04: 11727614-11736548 Phaseolus vulgaris
Phvul.004G072400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 11727614-11732613 Phaseolus vulgaris
Phvul.004G072400 10.0kb upstream 10.0kb upstream 13935 true Chr04: 11732614-11746548 Phaseolus vulgaris
Phvul.004G072400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 11736549-11746548 Phaseolus vulgaris
Phvul.004G072400 10.0kb downstream 10.0kb downstream 13935 true Chr04: 11722614-11736548 Phaseolus vulgaris
Phvul.004G072400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 11722614-11732613 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026369 5273 Angiosperm View MSA
122310130 5265 Fabidae View MSA
124065101 5270 Rosid View MSA
123751692 5271 Pentapetalae View MSA
122795762 5272 Eudicot View MSA
121344161 5274 Embryophyte View MSA
123425894 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.9088 0.0 134.245 High  
cufflinks 53.0818 0.0 137.314 High  
cufflinks 29.7741 0.0 77.6651   Low
cufflinks 74.9703 0.0 195.479 High High
cufflinks 40.4443 0.0 104.697 High  
cufflinks 23.206 0.0 61.3236   Low
cufflinks 42.9247 0.0 110.962 High  
cufflinks 49.6661 0.0 128.458 High  
cufflinks 52.1505 0.0 134.887 High  
cufflinks 28.8923 0.0 75.5133   Low
cufflinks 45.6633 0.0 118.044 High  

0 Strain