Gene : Phvul.004G062400 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31062:SF15 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 4-RELATED Genomic Order:  656
Name:  ? Phvul.004G062400 Secondary Identifier:  ? PAC:37162382
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G062400 0.5kb upstream 0.5kb upstream 2333 true Chr04: 8697883-8700215 Phaseolus vulgaris
Phvul.004G062400 0.5kb upstream 0.5kb upstream 500 false Chr04: 8699716-8700215 Phaseolus vulgaris
Phvul.004G062400 0.5kb downstream 0.5kb downstream 2333 true Chr04: 8697383-8699715 Phaseolus vulgaris
Phvul.004G062400 0.5kb downstream 0.5kb downstream 500 false Chr04: 8697383-8697882 Phaseolus vulgaris
Phvul.004G062400 1.0kb upstream 1.0kb upstream 2833 true Chr04: 8697883-8700715 Phaseolus vulgaris
Phvul.004G062400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 8699716-8700715 Phaseolus vulgaris
Phvul.004G062400 1.0kb downstream 1.0kb downstream 2833 true Chr04: 8696883-8699715 Phaseolus vulgaris
Phvul.004G062400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 8696883-8697882 Phaseolus vulgaris
Phvul.004G062400 2.0kb upstream 2.0kb upstream 3833 true Chr04: 8697883-8701715 Phaseolus vulgaris
Phvul.004G062400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 8699716-8701715 Phaseolus vulgaris
Phvul.004G062400 2.0kb downstream 2.0kb downstream 3833 true Chr04: 8695883-8699715 Phaseolus vulgaris
Phvul.004G062400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 8695883-8697882 Phaseolus vulgaris
Phvul.004G062400 5.0kb upstream 5.0kb upstream 6833 true Chr04: 8697883-8704715 Phaseolus vulgaris
Phvul.004G062400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 8699716-8704715 Phaseolus vulgaris
Phvul.004G062400 5.0kb downstream 5.0kb downstream 6833 true Chr04: 8692883-8699715 Phaseolus vulgaris
Phvul.004G062400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 8692883-8697882 Phaseolus vulgaris
Phvul.004G062400 10.0kb upstream 10.0kb upstream 11833 true Chr04: 8697883-8709715 Phaseolus vulgaris
Phvul.004G062400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 8699716-8709715 Phaseolus vulgaris
Phvul.004G062400 10.0kb downstream 10.0kb downstream 11833 true Chr04: 8687883-8699715 Phaseolus vulgaris
Phvul.004G062400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 8687883-8697882 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297625 5265 Fabidae View MSA
124063834 5270 Rosid View MSA
123740091 5271 Pentapetalae View MSA
122795119 5272 Eudicot View MSA
122042139 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 328.552 0.0 1031.99 High High
cufflinks 2.28768 0.0 7.47196    
cufflinks 12.5608 0.0 34.1496    
cufflinks 180.662 0.0 518.463 High High
cufflinks 92.5747 0.0 247.79 High  
cufflinks 6.33092 0.0 18.4125    
cufflinks 1.13353 0.0 3.99606    
cufflinks 0.0653688 0.0 0.294414 Low Low
cufflinks 2.10262 0.0 6.91305    
cufflinks 0.230116 0.0 0.929719 Low Low
cufflinks 110.487 0.0 300.344 High  

0 Strain