Gene : Phvul.004G063800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23074:SF17 - FIDGETIN-LIKE PROTEIN 1 Genomic Order:  670
Name:  ? Phvul.004G063800 Secondary Identifier:  ? PAC:37161728
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G063800 0.5kb upstream 0.5kb upstream 7226 true Chr04: 9114040-9121265 Phaseolus vulgaris
Phvul.004G063800 0.5kb upstream 0.5kb upstream 500 false Chr04: 9114040-9114539 Phaseolus vulgaris
Phvul.004G063800 0.5kb downstream 0.5kb downstream 7226 true Chr04: 9114540-9121765 Phaseolus vulgaris
Phvul.004G063800 0.5kb downstream 0.5kb downstream 500 false Chr04: 9121266-9121765 Phaseolus vulgaris
Phvul.004G063800 1.0kb upstream 1.0kb upstream 7726 true Chr04: 9113540-9121265 Phaseolus vulgaris
Phvul.004G063800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9113540-9114539 Phaseolus vulgaris
Phvul.004G063800 1.0kb downstream 1.0kb downstream 7726 true Chr04: 9114540-9122265 Phaseolus vulgaris
Phvul.004G063800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9121266-9122265 Phaseolus vulgaris
Phvul.004G063800 2.0kb upstream 2.0kb upstream 8726 true Chr04: 9112540-9121265 Phaseolus vulgaris
Phvul.004G063800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9112540-9114539 Phaseolus vulgaris
Phvul.004G063800 2.0kb downstream 2.0kb downstream 8726 true Chr04: 9114540-9123265 Phaseolus vulgaris
Phvul.004G063800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9121266-9123265 Phaseolus vulgaris
Phvul.004G063800 5.0kb upstream 5.0kb upstream 11726 true Chr04: 9109540-9121265 Phaseolus vulgaris
Phvul.004G063800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9109540-9114539 Phaseolus vulgaris
Phvul.004G063800 5.0kb downstream 5.0kb downstream 11726 true Chr04: 9114540-9126265 Phaseolus vulgaris
Phvul.004G063800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9121266-9126265 Phaseolus vulgaris
Phvul.004G063800 10.0kb upstream 10.0kb upstream 16726 true Chr04: 9104540-9121265 Phaseolus vulgaris
Phvul.004G063800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9104540-9114539 Phaseolus vulgaris
Phvul.004G063800 10.0kb downstream 10.0kb downstream 16726 true Chr04: 9114540-9131265 Phaseolus vulgaris
Phvul.004G063800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9121266-9131265 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304570 5265 Fabidae View MSA
124067039 5270 Rosid View MSA
123739074 5271 Pentapetalae View MSA
122788928 5272 Eudicot View MSA
122047289 5273 Angiosperm View MSA
123428918 5275 Viridiplantae View MSA
121345759 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.34762 0.0 4.26984   Low
cufflinks 3.89711 0.0 10.9762   High
cufflinks 2.38137 0.0 7.06713    
cufflinks 1.50676 0.0 4.74113   Low
cufflinks 3.33555 0.0 9.6165    
cufflinks 2.42499 0.0 7.16572    
cufflinks 3.15412 0.0 9.03535    
cufflinks 2.94758 0.0 8.49543    
cufflinks 2.72879 0.0 7.94864    
cufflinks 2.98566 0.0 8.66189    
cufflinks 3.99064 0.0 11.2592   High

0 Strain