Gene : Phvul.004G063900 P. vulgaris v2.1
Defline:  (1 of 7) PF03007//PF06974 - Wax ester synthase-like Acyl-CoA acyltransferase domain (WES_acyltransf) // Protein of unknown function (DUF1298) (DUF1298) Genomic Order:  671
Name:  ? Phvul.004G063900 Secondary Identifier:  ? PAC:37162199
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G063900 0.5kb upstream 0.5kb upstream 6728 true Chr04: 9180709-9187436 Phaseolus vulgaris
Phvul.004G063900 0.5kb upstream 0.5kb upstream 500 false Chr04: 9180709-9181208 Phaseolus vulgaris
Phvul.004G063900 0.5kb downstream 0.5kb downstream 6728 true Chr04: 9181209-9187936 Phaseolus vulgaris
Phvul.004G063900 0.5kb downstream 0.5kb downstream 500 false Chr04: 9187437-9187936 Phaseolus vulgaris
Phvul.004G063900 1.0kb upstream 1.0kb upstream 7228 true Chr04: 9180209-9187436 Phaseolus vulgaris
Phvul.004G063900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9180209-9181208 Phaseolus vulgaris
Phvul.004G063900 1.0kb downstream 1.0kb downstream 7228 true Chr04: 9181209-9188436 Phaseolus vulgaris
Phvul.004G063900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9187437-9188436 Phaseolus vulgaris
Phvul.004G063900 2.0kb upstream 2.0kb upstream 8228 true Chr04: 9179209-9187436 Phaseolus vulgaris
Phvul.004G063900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9179209-9181208 Phaseolus vulgaris
Phvul.004G063900 2.0kb downstream 2.0kb downstream 8228 true Chr04: 9181209-9189436 Phaseolus vulgaris
Phvul.004G063900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9187437-9189436 Phaseolus vulgaris
Phvul.004G063900 5.0kb upstream 5.0kb upstream 11228 true Chr04: 9176209-9187436 Phaseolus vulgaris
Phvul.004G063900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9176209-9181208 Phaseolus vulgaris
Phvul.004G063900 5.0kb downstream 5.0kb downstream 11228 true Chr04: 9181209-9192436 Phaseolus vulgaris
Phvul.004G063900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9187437-9192436 Phaseolus vulgaris
Phvul.004G063900 10.0kb upstream 10.0kb upstream 16228 true Chr04: 9171209-9187436 Phaseolus vulgaris
Phvul.004G063900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9171209-9181208 Phaseolus vulgaris
Phvul.004G063900 10.0kb downstream 10.0kb downstream 16228 true Chr04: 9181209-9197436 Phaseolus vulgaris
Phvul.004G063900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9187437-9197436 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313899 5265 Fabidae View MSA
124072323 5270 Rosid View MSA
123749190 5271 Pentapetalae View MSA
122797420 5272 Eudicot View MSA
122048260 5273 Angiosperm View MSA
123428993 5275 Viridiplantae View MSA
121310908 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.63596 0.0 13.5064    
cufflinks 5.03573 0.0 14.5382    
cufflinks 98.8334 0.0 275.949 High High
cufflinks 35.4249 0.0 91.7247 High  
cufflinks 4.53944 0.0 13.3693    
cufflinks 48.1307 0.0 126.144 High  
cufflinks 0.0443734 0.0 0.202032 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0241627 0.0 0.117362 Low Low
cufflinks 0.37525 0.0 1.42596    
cufflinks 6.38844 0.0 18.0964    

0 Strain