Gene : Phvul.007G003500 P. vulgaris v2.1
Defline:  (1 of 3) K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) Genomic Order:  34
Name:  ? Phvul.007G003500 Secondary Identifier:  ? PAC:37164539
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G003500 0.5kb upstream 0.5kb upstream 4113 true Chr07: 218922-223034 Phaseolus vulgaris
Phvul.007G003500 0.5kb upstream 0.5kb upstream 500 false Chr07: 218922-219421 Phaseolus vulgaris
Phvul.007G003500 0.5kb downstream 0.5kb downstream 4113 true Chr07: 219422-223534 Phaseolus vulgaris
Phvul.007G003500 0.5kb downstream 0.5kb downstream 500 false Chr07: 223035-223534 Phaseolus vulgaris
Phvul.007G003500 1.0kb upstream 1.0kb upstream 4613 true Chr07: 218422-223034 Phaseolus vulgaris
Phvul.007G003500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 218422-219421 Phaseolus vulgaris
Phvul.007G003500 1.0kb downstream 1.0kb downstream 4613 true Chr07: 219422-224034 Phaseolus vulgaris
Phvul.007G003500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 223035-224034 Phaseolus vulgaris
Phvul.007G003500 2.0kb upstream 2.0kb upstream 5613 true Chr07: 217422-223034 Phaseolus vulgaris
Phvul.007G003500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 217422-219421 Phaseolus vulgaris
Phvul.007G003500 2.0kb downstream 2.0kb downstream 5613 true Chr07: 219422-225034 Phaseolus vulgaris
Phvul.007G003500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 223035-225034 Phaseolus vulgaris
Phvul.007G003500 5.0kb upstream 5.0kb upstream 8613 true Chr07: 214422-223034 Phaseolus vulgaris
Phvul.007G003500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 214422-219421 Phaseolus vulgaris
Phvul.007G003500 5.0kb downstream 5.0kb downstream 8613 true Chr07: 219422-228034 Phaseolus vulgaris
Phvul.007G003500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 223035-228034 Phaseolus vulgaris
Phvul.007G003500 10.0kb upstream 10.0kb upstream 13613 true Chr07: 209422-223034 Phaseolus vulgaris
Phvul.007G003500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 209422-219421 Phaseolus vulgaris
Phvul.007G003500 10.0kb downstream 10.0kb downstream 13613 true Chr07: 219422-233034 Phaseolus vulgaris
Phvul.007G003500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 223035-233034 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254174 5265 Fabidae View MSA
124069923 5270 Rosid View MSA
123753548 5271 Pentapetalae View MSA
122791603 5272 Eudicot View MSA
122042476 5273 Angiosperm View MSA
121348767 5274 Embryophyte View MSA
123425134 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 113.262 0.0 331.342 High  
cufflinks 180.304 0.0 566.798 High High
cufflinks 101.766 0.0 292.998 High Low
cufflinks 143.4 0.0 427.695 High  
cufflinks 181.006 0.0 563.81 High High
cufflinks 108.784 0.0 316.913 High  
cufflinks 122.18 0.0 364.116 High  
cufflinks 145.637 0.0 444.257 High  
cufflinks 179.488 0.0 567.153 High High
cufflinks 103.221 0.0 298.104 High Low
cufflinks 168.719 0.0 524.876 High  

0 Strain