Gene : Phvul.004G059400 P. vulgaris v2.1
Defline:  (1 of 3) K18156 - mitochondrial inner membrane protease ATP23 [EC:3.4.24.-] (ATP23, XRCC6BP1) Genomic Order:  626
Name:  ? Phvul.004G059400 Secondary Identifier:  ? PAC:37162657
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G059400 0.5kb upstream 0.5kb upstream 5275 true Chr04: 8320348-8325622 Phaseolus vulgaris
Phvul.004G059400 0.5kb upstream 0.5kb upstream 500 false Chr04: 8320348-8320847 Phaseolus vulgaris
Phvul.004G059400 0.5kb downstream 0.5kb downstream 5275 true Chr04: 8320848-8326122 Phaseolus vulgaris
Phvul.004G059400 0.5kb downstream 0.5kb downstream 500 false Chr04: 8325623-8326122 Phaseolus vulgaris
Phvul.004G059400 1.0kb upstream 1.0kb upstream 5775 true Chr04: 8319848-8325622 Phaseolus vulgaris
Phvul.004G059400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 8319848-8320847 Phaseolus vulgaris
Phvul.004G059400 1.0kb downstream 1.0kb downstream 5775 true Chr04: 8320848-8326622 Phaseolus vulgaris
Phvul.004G059400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 8325623-8326622 Phaseolus vulgaris
Phvul.004G059400 2.0kb upstream 2.0kb upstream 6775 true Chr04: 8318848-8325622 Phaseolus vulgaris
Phvul.004G059400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 8318848-8320847 Phaseolus vulgaris
Phvul.004G059400 2.0kb downstream 2.0kb downstream 6775 true Chr04: 8320848-8327622 Phaseolus vulgaris
Phvul.004G059400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 8325623-8327622 Phaseolus vulgaris
Phvul.004G059400 5.0kb upstream 5.0kb upstream 9775 true Chr04: 8315848-8325622 Phaseolus vulgaris
Phvul.004G059400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 8315848-8320847 Phaseolus vulgaris
Phvul.004G059400 5.0kb downstream 5.0kb downstream 9775 true Chr04: 8320848-8330622 Phaseolus vulgaris
Phvul.004G059400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 8325623-8330622 Phaseolus vulgaris
Phvul.004G059400 10.0kb upstream 10.0kb upstream 14775 true Chr04: 8310848-8325622 Phaseolus vulgaris
Phvul.004G059400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 8310848-8320847 Phaseolus vulgaris
Phvul.004G059400 10.0kb downstream 10.0kb downstream 14775 true Chr04: 8320848-8335622 Phaseolus vulgaris
Phvul.004G059400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 8325623-8335622 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313422 5265 Fabidae View MSA
124065065 5270 Rosid View MSA
123736849 5271 Pentapetalae View MSA
122796958 5272 Eudicot View MSA
122045264 5273 Angiosperm View MSA
121345086 5274 Embryophyte View MSA
123426111 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.30975 0.0 10.5981    
cufflinks 3.3511 0.0 10.7215    
cufflinks 2.63102 0.0 8.62194    
cufflinks 5.61038 0.0 17.0632   High
cufflinks 2.1538 0.0 7.31912    
cufflinks 1.88724 0.0 6.43216   Low
cufflinks 2.7227 0.0 8.94017    
cufflinks 3.87653 0.0 12.1374    
cufflinks 2.26171 0.0 7.60923    
cufflinks 1.94894 0.0 6.65291   Low
cufflinks 2.92577 0.0 9.5787    

0 Strain