Gene : Phvul.004G038400 P. vulgaris v2.1
Genomic Order:  421 Name:  ? Phvul.004G038400
Secondary Identifier:  ? PAC:37163087
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G038400 0.5kb upstream 0.5kb upstream 1156 true Chr04: 4508690-4509845 Phaseolus vulgaris
Phvul.004G038400 0.5kb upstream 0.5kb upstream 500 false Chr04: 4509346-4509845 Phaseolus vulgaris
Phvul.004G038400 0.5kb downstream 0.5kb downstream 1156 true Chr04: 4508190-4509345 Phaseolus vulgaris
Phvul.004G038400 0.5kb downstream 0.5kb downstream 500 false Chr04: 4508190-4508689 Phaseolus vulgaris
Phvul.004G038400 1.0kb upstream 1.0kb upstream 1656 true Chr04: 4508690-4510345 Phaseolus vulgaris
Phvul.004G038400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4509346-4510345 Phaseolus vulgaris
Phvul.004G038400 1.0kb downstream 1.0kb downstream 1656 true Chr04: 4507690-4509345 Phaseolus vulgaris
Phvul.004G038400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4507690-4508689 Phaseolus vulgaris
Phvul.004G038400 2.0kb upstream 2.0kb upstream 2656 true Chr04: 4508690-4511345 Phaseolus vulgaris
Phvul.004G038400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4509346-4511345 Phaseolus vulgaris
Phvul.004G038400 2.0kb downstream 2.0kb downstream 2656 true Chr04: 4506690-4509345 Phaseolus vulgaris
Phvul.004G038400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4506690-4508689 Phaseolus vulgaris
Phvul.004G038400 5.0kb upstream 5.0kb upstream 5656 true Chr04: 4508690-4514345 Phaseolus vulgaris
Phvul.004G038400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4509346-4514345 Phaseolus vulgaris
Phvul.004G038400 5.0kb downstream 5.0kb downstream 5656 true Chr04: 4503690-4509345 Phaseolus vulgaris
Phvul.004G038400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4503690-4508689 Phaseolus vulgaris
Phvul.004G038400 10.0kb upstream 10.0kb upstream 10656 true Chr04: 4508690-4519345 Phaseolus vulgaris
Phvul.004G038400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4509346-4519345 Phaseolus vulgaris
Phvul.004G038400 10.0kb downstream 10.0kb downstream 10656 true Chr04: 4498690-4509345 Phaseolus vulgaris
Phvul.004G038400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4498690-4508689 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121672853 5273 Angiosperm View MSA
122297116 5265 Fabidae View MSA
124069625 5270 Rosid View MSA
123627875 5271 Pentapetalae View MSA
122662214 5272 Eudicot View MSA
120944761 5274 Embryophyte View MSA
122985175 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 70.4456 0.0 182.723 High  
cufflinks 87.1785 0.0 225.45 High  
cufflinks 297.461 0.0 814.649 High High
cufflinks 135.515 0.0 352.28 High  
cufflinks 119.067 0.0 307.992 High  
cufflinks 118.816 0.0 307.683 High  
cufflinks 43.4719 0.0 115.545 High  
cufflinks 27.4126 0.0 75.684   Low
cufflinks 38.5234 0.0 103.134 High Low
cufflinks 56.951 0.0 149.49 High  
cufflinks 135.81 0.0 352.424 High  

0 Strain